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Home > SCOP hierarchy > Hypothetical protein YgiW > Domain combinations

Domain combinations for Hypothetical protein YgiW superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Hypothetical protein YgiW domain in that genome.

Complete genomes
Genome Number Proteins

Felis_catus_76_6.2 (Domestic cat) 1 1

Saccoglossus_kowalevskii_v3.0 1 1

Oikopleura_dioica 1 1

Adineta_vaga 2 2

Daphnia_pulex_ (Common water flea) 1 1

Ixodes_scapularis__(Preliminary) (Black-legged tick) 1 1

Thelohanellus_kitauei 1 1

Nematostella_vectensis_1.0 (Starlet sea anemone) 1 1

Phytophthora_capsici_ 1 1

Thermosynechococcus_sp._NK55 1 1

Microcoleus_sp._PCC_7113 1 1

Gloeocapsa_sp._PCC_7428 1 1

Halothece_sp._PCC_7418 1 1

Microcystis_aeruginosa_NIES-843 1 1

Rivularia_sp._PCC_7116 1 1

Anabaena_variabilis_ATCC_29413 1 1

Nostoc_sp._PCC_7107 1 1

Nostoc_sp._PCC_7120 1 1

Nostoc_sp._PCC_7524 1 1

Anabaena_sp._90 1 1

Anaerolinea_thermophila_UNI-1 1 1

Megamonas_hypermegale 1 1

Pelotomaculum_thermopropionicum_SI 1 1

Clostridium_perfringens_ATCC_13124 1 1

Chlorobium_luteolum_DSM_273 1 1

Thermodesulfatator_indicus_DSM_15286 1 1

Desulfurispirillum_indicum_S5 1 1

Candidatus_Solibacter_usitatus_Ellin6076 1 1

Arcobacter_sp._L 1 1

Campylobacter_curvus_525.92 1 1

Campylobacter_concisus_13826 1 1

Campylobacter_sp._03-427 1 1

Campylobacter_fetus_subsp._fetus_82-40 1 1

Desulfovibrio_piezophilus 1 1

Desulfovibrio_salexigens_DSM_2638 1 1

Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 3 3

Geobacter_uraniireducens_Rf4 1 1

Sorangium_cellulosum_'So_ce_56' 1 1

Stigmatella_aurantiaca_DW4/3-1 1 1

Corallococcus_coralloides_DSM_2259 1 1

Laribacter_hongkongensis_HLHK9 1 1

Cupriavidus_taiwanensis_LMG_19424 1 1

Cupriavidus_necator_N-1 1 1

Ralstonia_eutropha_H16 1 1

Burkholderia_sp._CCGE1002 1 1

Burkholderia_ambifaria_AMMD 1 1

Burkholderia_cenocepacia_HI2424 1 1

Burkholderia_multivorans_ATCC_17616 1 1

Burkholderia_vietnamiensis_G4 1 1

Burkholderia_gladioli_BSR3 1 1

Collimonas_fungivorans_Ter331 1 1

Bordetella_avium_197N 1 1

Bordetella_pertussis_Tohama_I 1 1

Bordetella_parapertussis_12822 1 1

Bordetella_bronchiseptica_RB50 1 1

Dinoroseobacter_shibae_DFL_12 1 1

Ketogulonicigenium_vulgare_Y25 1 1

Ketogulonigenium_vulgarum_WSH-001 1 1

Tistrella_mobilis_KA081020-065 1 1

Micavibrio_aeruginosavorus_ARL-13 1 1

Methylobacterium_populi_BJ001 1 1

Methylobacterium_radiotolerans_JCM_2831 1 1

Ochrobactrum_anthropi_ATCC_49188 1 1

Rhizobium_leguminosarum_bv._viciae_3841 1 1

Agrobacterium_tumefaciens_str._C58 1 1

Agrobacterium_sp._H13-3 1 1

Agrobacterium_vitis_S4 1 1

Aggregatibacter_aphrophilus_NJ8700 1 1

Aggregatibacter_actinomycetemcomitans_D7S-1 1 1

Pasteurella_multocida_subsp._multocida_str._3480 1 1

Haemophilus_parasuis_SH0165 2 2

Haemophilus_parainfluenzae_T3T1 2 2

Haemophilus_influenzae_PittEE 1 1

Actinobacillus_succinogenes_130Z 1 1

Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 3 3

Oceanimonas_sp._GK1 2 2

Aeromonas_veronii_B565 2 2

Aeromonas_salmonicida_subsp._salmonicida_A449 2 2

Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 2 2

Aliivibrio_salmonicida_LFI1238 3 3

Vibrio_fischeri_MJ11 4 4

Vibrio_sp._Ex25 2 2

Vibrio_harveyi_ATCC_BAA-1116 1 1

Vibrio_parahaemolyticus_RIMD_2210633 2 2

Vibrio_splendidus_LGP32 1 1

Vibrio_anguillarum_775 1 1

Vibrio_furnissii_NCTC_11218 1 1

Vibrio_vulnificus_MO6-24/O 2 2

Vibrio_cholerae_O395 1 1

Photobacterium_profundum_SS9 2 2

Shewanella_piezotolerans_WP3 1 1

Shewanella_loihica_PV-4 1 1

Shewanella_halifaxensis_HAW-EB4 2 2

Shewanella_sediminis_HAW-EB3 1 1

Shewanella_pealeana_ATCC_700345 2 2

Shewanella_oneidensis_MR-1 2 2

Shewanella_woodyi_ATCC_51908 2 2

Shewanella_amazonensis_SB2B 1 1

Alcanivorax_borkumensis_SK2 1 1

Nitrosococcus_watsonii_C-113 1 1

Photorhabdus_asymbiotica 1 1

Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1

Xenorhabdus_nematophila_ATCC_19061 1 1

Providencia_stuartii_MRSN_2154 1 1

Proteus_mirabilis_HI4320 1 1

Edwardsiella_ictaluri_93-146 2 2

Edwardsiella_tarda_EIB202 3 3

Rahnella_sp._Y9602 1 1

Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 2 2

Yersinia_pseudotuberculosis_IP_31758 1 1

Yersinia_pestis_Pestoides_F 1 1

Yersinia_enterocolitica_subsp._enterocolitica_8081 1 1

Serratia_sp._AS12 1 1

Serratia_plymuthica_AS9 1 1

Serratia_proteamaculans_568 1 1

Dickeya_zeae_Ech1591 1 1

Pectobacterium_wasabiae_WPP163 1 1

Pectobacterium_sp._SCC3193 1 1

Pectobacterium_atrosepticum_SCRI1043 1 1

Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1

Pantoea_sp._At-9b 1 1

Pantoea_vagans_C9-1 4 4

Pantoea_ananatis_LMG_20103 2 2

Erwinia_sp._Ejp617 1 1

Erwinia_billingiae_Eb661 2 2

Erwinia_pyrifoliae_Ep1/96 1 1

Erwinia_amylovora_ATCC_49946 1 1

Escherichia_blattae_DSM_4481 1 1

Cronobacter_turicensis_z3032 2 2

Cronobacter_sakazakii_ES15 2 2

Enterobacteriaceae_bacterium_strain_FGI_57 2 2

Shigella_sonnei_Ss046 2 2

Shigella_flexneri_5_str._8401 2 2

Shigella_dysenteriae_Sd197 2 2

Shigella_boydii_CDC_3083-94 2 2

Salmonella_bongori_NCTC_12419 2 2

Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 3 3

Klebsiella_oxytoca_E718 2 2

Klebsiella_variicola_At-22 2 2

Klebsiella_pneumoniae_NTUH-K2044 2 2

Enterobacter_aerogenes_KCTC_2190 2 2

Escherichia_fergusonii_ATCC_35469 2 2

Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 2 2

Enterobacter_sp._R4-368 2 2

Enterobacter_sp._638 2 2

Enterobacter_asburiae_LF7a 1 1

Enterobacter_cloacae_subsp._dissolvens_SDM 2 2

Citrobacter_rodentium_ICC168 3 3

Citrobacter_koseri_ATCC_BAA-895 1 1

Azotobacter_vinelandii_DJ 1 1

Pseudomonas_entomophila_L48 1 1

Pseudomonas_fulva_12-X 1 1

Pseudomonas_putida_F1 1 1

Pseudomonas_mendocina_ymp 1 1

Pseudomonas_aeruginosa_UCBPP-PA14 1 1

Pseudomonas_sp._VLB120 1 1

Acinetobacter_oleivorans_DR1 2 2

Acinetobacter_calcoaceticus_PHEA-2 2 2

Acinetobacter_baumannii_ATCC_17978 1 1

Acinetobacter_sp._ADP1 2 2

Nanoarchaeum_equitans_Kin4-M 1 1

Methanosphaerula_palustris_E1-9c 1 1

Methanoplanus_petrolearius_DSM_11571 1 1

Methanopyrus_kandleri_AV19 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome Number Proteins

Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1

NCBI_plasmid_sequences_(Plasmids) 21 21

Protein_Data_Bank_(all_PDB_sequenc) 1 1

SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3 3

STRING_v9.0.5_(STRING) 289 289

TargetDB__(Targets) 5 5

Uniprot_2018_03_genome 4408 4394

NCBI_2017_08_genome 56202 56189

UniProt__viral_sequences_(Viral) 6 6

NCBI_viral_sequences_(Viral) 6 6

PDB_chains_(SCOP_1.75)_(PDB) 1 1

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Domain combinations for Hypothetical protein YgiW superfamily in groups of genomes