SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for GK1464-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a GK1464-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 1 1
Geobacillus_sp._WCH70 1 1
Geobacillus_thermodenitrificans_NG80-2 1 1
Bacillus_megaterium_DSM_319 1 1

Strains
Genome     Number   Proteins
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y4.1MC1 1 1
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_megaterium_WSH-002 1 1
Bacillus_megaterium_QM_B1551 1 1

Others
Genome     Number   Proteins
PDB_chains_(SCOP_1.75)_(PDB) 1 1
TargetDB__(Targets) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 2 2
STRING_v9.0.5_(STRING) 4 4
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 6 6
Uniprot_2018_03_genome 123 123
NCBI_2017_08_genome 203 203

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