SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for T-antigen specific domain-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a T-antigen specific domain-like domain in that genome.

Strains
Genome     Number   Proteins
Campylobacter_jejuni_subsp._jejuni_00-2544 1 1
Campylobacter_jejuni_subsp._jejuni_S3 1 1
Campylobacter_jejuni_subsp._jejuni_81-176 1 1
Campylobacter_coli_CVM_N29710 1 1

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 7 7
PDB_chains_(SCOP_1.75)_(PDB) 1 1
STRING_v9.0.5_(STRING) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 6 6
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 8 8
NCBI_viral_sequences_(Viral) 46 46
UniProt__viral_sequences_(Viral) 209 209
NCBI_2017_08_genome 405 405
Uniprot_2018_03_genome 431 431

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