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Domain combinations for STAT superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a STAT domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   29 29
Pan_troglodytes_76_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_76_3.1   (Western gorilla)   12 12
Pongo_abelii_76_2   (Sumatran orangutan)   7 7
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   9 9
Papio_anubis_76   (Olive baboon)   7 7
Macaca_mulatta_76_1   (Rhesus monkey)   7 7
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   21 21
Otolemur_garnettii_76_3   (Small-eared galago)   7 7
Microcebus_murinus_76_1   (Gray mouse lemur)   7 7
Rattus_norvegicus_76_5.0   (Norway rat)   7 7
Mus_musculus_76_38   (House mouse)   20 20
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   7 7
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   8 7
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   6 6
Cavia_porcellus_76_3   (Domestic guinea pig)   6 6
Oryctolagus_cuniculus_76_2   (Rabbit)   7 7
Ochotona_princeps_76   (American pika)   7 7
Tupaia_belangeri_76   (Northern tree shrew)   7 6
Sus_scrofa_76_10.2   (Pig)   12 12
Bos_taurus_76_3.1   (Cattle)   8 8
Ovis_aries_76_3.1   (Sheep)   7 7
Vicugna_pacos_76_1   (Alpaca)   4 4
Tursiops_truncatus_76_1   (Bottlenose dolphin)   6 6
Mustela_putorius_furo_76_1.0   (Domestic ferret)   7 7
Ailuropoda_melanoleuca_76_1   (Giant panda)   6 6
Canis_familiaris_76_3.1   (Dog)   11 11
Felis_catus_76_6.2   (Domestic cat)   9 9
Equus_caballus_76_2   (Horse)   8 8
Myotis_lucifugus_76_2.0   (Little brown bat)   7 7
Pteropus_vampyrus_76_1   (Large flying fox)   7 7
Sorex_araneus_76_1   (European shrew)   3 3
Erinaceus_europaeus_76   (Western European hedgehog)   7 7
Procavia_capensis_76_1   (Cape rock hyrax)   8 7
Loxodonta_africana_76_3   (African savanna elephant)   10 10
Echinops_telfairi_76   (Small Madagascar hedgehog)   6 6
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   7 7
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   6 5
Macropus_eugenii_76_1.0   (Tammar wallaby)   7 6
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   8 8
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   6 6
Ornithorhynchus_anatinus_76_5   (Platypus)   5 5
Saccoglossus_kowalevskii_v3.0 6 6
Petromyzon_marinus_76_7.0   (Sea lamprey)   4 4
Meleagris_gallopavo_76_2   (Turkey)   6 6
Gallus_gallus_76_4   (Chicken)   6 6
Anas_platyrhynchos_76_1.0   (Mallard)   3 3
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   3 3
Ficedula_albicollis_76_1.0   (Collared flycatcher)   4 4
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   5 4
Anolis_carolinensis_76_2.0   (Green anole)   6 5
Xenopus_laevis_   (African clawed frog)   19 19
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   8 8
Latimeria_chalumnae_76_1   (Coelacanth)   7 7
Lepisosteus_oculatus_76   (Spotted gar)   6 6
Gadus_morhua_76_1   (Atlantic cod)   7 7
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   11 11
Takifugu_rubripes_76_4   (Torafugu)   17 17
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   15 15
Oryzias_latipes_76_1   (Japanese medaka)   8 7
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   7 7
Poecilia_formosa_76   (Amazon molly)   10 8
Oreochromis_niloticus_76_1.0   (Nile tilapia)   9 9
Astyanax_mexicanus_76   (Mexican tetra)   8 8
Danio_rerio_76_9   (Zebrafish)   19 19
Oikopleura_dioica 3 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   6 6
Ciona_intestinalis_76   (Vase tunicate)   3 3
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1 1
Crassostrea_gigas_22   (Pacific oyster)   1 1
Lottia_gigantea_   (Owl limpet)   1 1
Helobdella_robusta_ 1 1
Capitella_sp._I_ 5 5
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1 1
Heliconius_melpomene_   (Postman butterfly)   1 1
Bombyx_mori_   (Domestic silkworm)   2 2
Nasonia_vitripennis_   (Jewel wasp)   1 1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3 3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1 1
Linepithema_humile_v1.1   (Argentine ant)   1 1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1 1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1 1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1 1
Atta_cephalotes_v1.1 1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1 1
Lucilia_cuprina   (Australian sheep blowfly)   1 1
Drosophila_grimshawi_1.3 1 1
Drosophila_willistoni_1.3 1 1
Drosophila_pseudoobscura_2.13 1 1
Drosophila_persimilis_1.3 1 1
Drosophila_suzukii 1 1
Drosophila_yakuba_1.3 3 3
Drosophila_simulans_1.3 1 1
Drosophila_sechellia_1.3 1 1
Drosophila_melanogaster_76_5   (Fruit fly)   5 5
Drosophila_erecta_1.3 1 1
Drosophila_ananassae_1.3 1 1
Drosophila_virilis_1.2 1 1
Drosophila_mojavensis_1.3 1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3 3
Anopheles_darlingi_22   (American malaria mosquito)   1 1
Anopheles_gambiae_49_3j   (African malaria mosquito)   2 2
Tribolium_castaneum_3.0   (Red flour beetle)   1 1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Acyrthosiphon_pisum_   (Pea aphid)   2 2
Rhodnius_prolixus_22 1 1
Daphnia_pulex_   (Common water flea)   1 1
Strigamia_maritima_22 1 1
Sarcoptes_scabiei 2 2
Tetranychus_urticae_   (Two-spotted spider mite)   1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1 1
Pristionchus_pacificus_ 1 1
Meloidogyne_hapla_ 1 1
Onchocerca_volvulus_22 2 2
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   5 5
Caenorhabditis_japonica_ 1 1
Caenorhabditis_brenneri_ 1 1
Caenorhabditis_remanei_ 3 3
Caenorhabditis_elegans_76_235   (Roundworm)   3 3
Caenorhabditis_briggsae_2 1 1
Trichinella_spiralis_22 1 1
Mnemiopsis_leidyi   (Sea walnut)   2 2
Acropora_digitifera_v1.0 1 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   1 1
Hydra_vulgaris 1 1
Amphimedon_queenslandica 2 2
Trichoplax_adhaerens_ 2 2
Proterospongia_sp._ATCC_50818_ 1 1
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Dictyostelium_discoideum 4 4
Dictyostelium_purpureum_ 3 3
Thecamonas_trahens_ATCC_50062_ 2 2
Chlamydophila_pecorum_E58 1 1
Chlamydophila_caviae_GPIC 1 1
Chlamydophila_felis_Fe/C-56 1 1
Chlamydophila_abortus_S26/3 1 1
Chlamydia_psittaci_01DC11 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   10 10
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   5 5
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   2 2
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2 2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3 3
Chlamydia_pecorum_P787 1 1
Chlamydia_pecorum_W73 1 1
Chlamydia_pecorum_PV3056/3 1 1
Chlamydia_psittaci_01DC12 1 1
Chlamydia_psittaci_WC 1 1
Chlamydia_psittaci_M56 1 1
Chlamydia_psittaci_WS/RT/E30 1 1
Chlamydia_psittaci_VS225 1 1
Chlamydia_psittaci_MN 1 1
Chlamydia_psittaci_GR9 1 1
Chlamydia_psittaci_84/55 1 1
Chlamydia_psittaci_08DC60 1 1
Chlamydia_psittaci_02DC15 1 1
Chlamydia_psittaci_C19/98 1 1
Chlamydia_psittaci_NJ1 1 1
Chlamydia_psittaci_CP3 1 1
Chlamydophila_psittaci_RD1 1 1
Chlamydia_psittaci_Mat116 1 1
Chlamydophila_psittaci_6BC 1 1
Chlamydophila_psittaci_6BC 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   7 7
Pan_troglodytes_69_2.1.4   (Chimpanzee)   6 6
Gorilla_gorilla_69_3.1   (Western gorilla)   7 7
Pongo_abelii_69_2   (Sumatran orangutan)   6 6
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   6 6
Macaca_mulatta_69_1   (Rhesus monkey)   7 7
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8 8
Otolemur_garnettii_69_3   (Small-eared galago)   7 7
Microcebus_murinus_69_1   (Gray mouse lemur)   7 7
Rattus_norvegicus_69_3.4   (Norway rat)   6 6
Mus_musculus_69_38   (House mouse)   7 7
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   7 7
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   8 7
Cavia_porcellus_69_3   (Domestic guinea pig)   6 6
Oryctolagus_cuniculus_69_2   (Rabbit)   6 6
Ochotona_princeps_69   (American pika)   7 7
Tupaia_belangeri_69   (Northern tree shrew)   7 6
Sus_scrofa_69_10.2   (Pig)   12 12
Bos_taurus_69_3.1   (Cattle)   7 7
Vicugna_pacos_69_1   (Alpaca)   4 4
Tursiops_truncatus_69_1   (Bottlenose dolphin)   6 6
Mustela_putorius_furo_69_1.0   (Domestic ferret)   7 7
Ailuropoda_melanoleuca_69_1   (Giant panda)   6 6
Canis_familiaris_69_3.1   (Dog)   8 8
Felis_catus_69   (Domestic cat)   7 6
Equus_caballus_69_2   (Horse)   7 7
Myotis_lucifugus_69_2.0   (Little brown bat)   7 7
Pteropus_vampyrus_69_1   (Large flying fox)   7 7
Sorex_araneus_69_1   (European shrew)   3 3
Erinaceus_europaeus_69   (Western European hedgehog)   7 7
Procavia_capensis_69_1   (Cape rock hyrax)   8 7
Loxodonta_africana_69_3   (African savanna elephant)   8 8
Echinops_telfairi_69   (Small Madagascar hedgehog)   6 6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   7 7
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   6 5
Macropus_eugenii_69_1.0   (Tammar wallaby)   7 6
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   6 6
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   6 6
Ornithorhynchus_anatinus_69_5   (Platypus)   4 4
Petromyzon_marinus_69_7.0   (Sea lamprey)   4 4
Meleagris_gallopavo_69_2   (Turkey)   5 5
Gallus_gallus_69_2   (Chicken)   4 3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   3 3
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   3 2
Anolis_carolinensis_69_2.0   (Green anole)   5 5
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   7 7
Latimeria_chalumnae_69_1   (Coelacanth)   5 5
Gadus_morhua_69_1   (Atlantic cod)   7 7
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   7 7
Takifugu_rubripes_69_4   (Torafugu)   7 7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   7 7
Oryzias_latipes_69_1   (Japanese medaka)   7 6
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   7 7
Oreochromis_niloticus_69_1.0   (Nile tilapia)   7 7
Danio_rerio_69_9   (Zebrafish)   8 8
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2 2
Ciona_intestinalis_69   (Vase tunicate)   3 3
Drosophila_melanogaster_69_5   (Fruit fly)   1 1
Caenorhabditis_elegans_69_215   (Roundworm)   1 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   30 30
Homo_sapiens__(NCBI_version)   (Human)   15 15
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   7 7
Loa_loa_v3.3_(Request)   (Eye worm)   1 1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2 2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   1 1
Protein_Data_Bank_(all_PDB_sequenc) 23 23
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 38 38
STRING_v9.0.5_(STRING) 209 206
Uniprot_2018_03_genome 2193 2168
NCBI_2017_08_genome 3982 3970
PDB_chains_(SCOP_1.75)_(PDB) 3 3
TargetDB__(Targets) 12 12

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