SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for Acid proteases superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Acid proteases domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   47 47
Pan_troglodytes_76_2.1.4   (Chimpanzee)   16 16
Gorilla_gorilla_76_3.1   (Western gorilla)   23 23
Pongo_abelii_76_2   (Sumatran orangutan)   14 14
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   16 16
Papio_anubis_76   (Olive baboon)   15 15
Macaca_mulatta_76_1   (Rhesus monkey)   30 30
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   30 28
Otolemur_garnettii_76_3   (Small-eared galago)   31 31
Microcebus_murinus_76_1   (Gray mouse lemur)   12 11
Rattus_norvegicus_76_5.0   (Norway rat)   16 16
Mus_musculus_76_38   (House mouse)   29 29
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   9 9
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   19 19
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   11 11
Cavia_porcellus_76_3   (Domestic guinea pig)   13 13
Oryctolagus_cuniculus_76_2   (Rabbit)   29 28
Ochotona_princeps_76   (American pika)   29 25
Tupaia_belangeri_76   (Northern tree shrew)   16 11
Sus_scrofa_76_10.2   (Pig)   29 29
Bos_taurus_76_3.1   (Cattle)   77 77
Ovis_aries_76_3.1   (Sheep)   95 95
Vicugna_pacos_76_1   (Alpaca)   10 9
Tursiops_truncatus_76_1   (Bottlenose dolphin)   12 11
Mustela_putorius_furo_76_1.0   (Domestic ferret)   18 18
Ailuropoda_melanoleuca_76_1   (Giant panda)   17 17
Canis_familiaris_76_3.1   (Dog)   26 26
Felis_catus_76_6.2   (Domestic cat)   45 44
Equus_caballus_76_2   (Horse)   25 25
Myotis_lucifugus_76_2.0   (Little brown bat)   21 21
Pteropus_vampyrus_76_1   (Large flying fox)   13 12
Sorex_araneus_76_1   (European shrew)   10 8
Erinaceus_europaeus_76   (Western European hedgehog)   15 14
Procavia_capensis_76_1   (Cape rock hyrax)   13 11
Loxodonta_africana_76_3   (African savanna elephant)   19 19
Echinops_telfairi_76   (Small Madagascar hedgehog)   13 12
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   23 23
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   7 5
Macropus_eugenii_76_1.0   (Tammar wallaby)   13 13
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   42 42
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   93 93
Ornithorhynchus_anatinus_76_5   (Platypus)   12 11
Saccoglossus_kowalevskii_v3.0 22 22
Petromyzon_marinus_76_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_76_2   (Turkey)   16 16
Gallus_gallus_76_4   (Chicken)   13 13
Anas_platyrhynchos_76_1.0   (Mallard)   13 13
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   15 15
Ficedula_albicollis_76_1.0   (Collared flycatcher)   13 13
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   30 29
Anolis_carolinensis_76_2.0   (Green anole)   37 37
Xenopus_laevis_   (African clawed frog)   44 44
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   33 33
Latimeria_chalumnae_76_1   (Coelacanth)   60 60
Lepisosteus_oculatus_76   (Spotted gar)   19 19
Gadus_morhua_76_1   (Atlantic cod)   12 12
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   10 10
Takifugu_rubripes_76_4   (Torafugu)   32 32
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   16 16
Oryzias_latipes_76_1   (Japanese medaka)   18 18
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   8 8
Poecilia_formosa_76   (Amazon molly)   8 8
Oreochromis_niloticus_76_1.0   (Nile tilapia)   15 15
Astyanax_mexicanus_76   (Mexican tetra)   20 19
Danio_rerio_76_9   (Zebrafish)   14 14
Oikopleura_dioica 9 9
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   6 6
Ciona_intestinalis_76   (Vase tunicate)   4 4
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   70 68
Adineta_vaga 18 18
Octopus_bimaculoides_280 21 21
Crassostrea_gigas_22   (Pacific oyster)   8 7
Lottia_gigantea_   (Owl limpet)   24 24
Helobdella_robusta_ 35 35
Capitella_sp._I_ 18 18
Danaus_plexippus_OGS1.0   (Monarch butterfly)   6 6
Heliconius_melpomene_   (Postman butterfly)   8 8
Bombyx_mori_   (Domestic silkworm)   39 38
Nasonia_vitripennis_   (Jewel wasp)   46 45
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   5 5
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   22 22
Linepithema_humile_v1.1   (Argentine ant)   18 18
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   8 8
Solenopsis_invicta_v.2.2.3   (Red fire ant)   20 20
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   18 15
Atta_cephalotes_v1.1 14 13
Camponotus_floridanus_v3.3   (Florida carpenter ant)   89 87
Lucilia_cuprina   (Australian sheep blowfly)   12 12
Drosophila_grimshawi_1.3 13 13
Drosophila_willistoni_1.3 22 22
Drosophila_pseudoobscura_2.13 30 29
Drosophila_persimilis_1.3 15 15
Drosophila_suzukii 13 10
Drosophila_yakuba_1.3 17 17
Drosophila_simulans_1.3 16 15
Drosophila_sechellia_1.3 28 28
Drosophila_melanogaster_76_5   (Fruit fly)   14 14
Drosophila_erecta_1.3 22 21
Drosophila_ananassae_1.3 20 20
Drosophila_virilis_1.2 9 9
Drosophila_mojavensis_1.3 10 10
Megaselia_scalaris_22 22 16
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   6 6
Anopheles_darlingi_22   (American malaria mosquito)   2 2
Anopheles_gambiae_49_3j   (African malaria mosquito)   1 1
Tribolium_castaneum_3.0   (Red flour beetle)   69 64
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   2 2
Acyrthosiphon_pisum_   (Pea aphid)   22 22
Rhodnius_prolixus_22 34 34
Daphnia_pulex_   (Common water flea)   56 52
Strigamia_maritima_22 40 40
Sarcoptes_scabiei 7 7
Tetranychus_urticae_   (Two-spotted spider mite)   3 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   10 10
Pristionchus_pacificus_ 60 58
Meloidogyne_incognita_   (Southern root-knot nematode)   64 59
Meloidogyne_hapla_ 45 45
Onchocerca_volvulus_22 6 6
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   11 11
Caenorhabditis_japonica_ 153 149
Caenorhabditis_brenneri_ 82 80
Caenorhabditis_remanei_ 167 161
Caenorhabditis_elegans_76_235   (Roundworm)   35 34
Caenorhabditis_briggsae_2 40 38
Trichinella_spiralis_22 43 43
Hymenolepis_microstoma_ 21 19
Echinococcus_multilocularis_ 4 4
Echinococcus_granulosus_ 3 3
Taenia_solium_   (Pork tapeworm)   20 20
Schistosoma_mansoni_ 17 17
Mnemiopsis_leidyi   (Sea walnut)   30 30
Thelohanellus_kitauei 182 182
Acropora_digitifera_v1.0 51 51
Nematostella_vectensis_1.0   (Starlet sea anemone)   17 17
Hydra_vulgaris 36 36
Amphimedon_queenslandica 72 72
Trichoplax_adhaerens_ 13 13
Proterospongia_sp._ATCC_50818_ 4 3
Monosiga_brevicollis_ 5 4
Sphaeroforma_arctica_JP610_ 8 8
Capsaspora_owczarzaki_ATCC_30864_ 6 6
Conidiobolus_coronatus_NRRL28638_v1.0 4 4
Mortierella_verticillata_NRRL_6337_ 33 33
Phycomyces_blakesleeanus_ 42 42
Rhizopus_oryzae_RA_99-880_ 205 203
Mucor_circinelloides_ 28 28
Rhizomucor_miehei_CAU432_ 30 29
Malassezia_globosa_CBS_7966_ 38 38
Sporisorium_reilianum_22 10 10
Ustilago_maydis_ 11 11
Mixia_osmundae_IAM_14324_v1.0 54 50
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 35 35
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 154 154
Melampsora_laricis-populina_ 35 34
Rhodotorula_graminis_WP1_v1.0 11 11
Sporobolomyces_roseus_IAM_13481_ 15 15
Microbotryum_violaceum_22 21 21
Wallemia_sebi_v1.0 2 2
Sphaerobolus_stellatus_v1.0 194 194
Piloderma_croceum_F_1598_v1.0 56 56
Serpula_lacrymans_var._lacrymans_S7.9_ 57 57
Coniophora_puteana 55 55
Hydnomerulius_pinastri_v2.0 43 43
Paxillus_rubicundulus_Ve08.2h10_v1.0 33 33
Pisolithus_microcarpus_441_v1.0 32 32
Pisolithus_tinctorius_Marx_270_v1.0 67 67
Scleroderma_citrinum_Foug_A_v1.0 61 61
Coprinopsis_cinerea_okayama7_130_v3 18 18
Pleurotus_ostreatus_   (Oyster mushroom)   44 44
Amanita_thiersii_Skay4041_v1.0 20 20
Amanita_muscaria_Koide_v1.0   (Fly agaric)   47 47
Galerina_marginata_v1.0 46 46
Hebeloma_cylindrosporum_h7_v2.0 22 22
Laccaria_bicolor_S238N-H82_ 58 58
Agaricus_bisporus_var._bisporus_ 37 37
Schizophyllum_commune_ 42 42
Stereum_hirsutum_FP-91666_SS1__v1.0 42 42
Heterobasidion_annosum_ 39 39
Gloeophyllum_trabeumv1.0 57 57
Punctularia_strigosozonata_v1.0 70 67
Sebacina_vermifera_MAFF_305830_v1.0 19 19
Fomitiporia_mediterranea_v1.0 47 46
Tulasnella_calospora_AL13/4D_v1.0 46 46
Postia_placenta_ 121 118
Wolfiporia_cocos_MD-104_SS10__v1.0 41 41
Fomitopsis_pinicolav1.0 66 66
Fomitopsis_pinicola_FP-58527_SS1_v3.0 59 59
Phanerochaete_chrysosporium_RP-78_2.1 145 145
Dichomitus_squalens 59 59
Trametes_versicolor_v1.0 86 85
Tremella_mesenterica_   (Witches' butter)   22 22
Daldinia_eschscholzii_EC12_v1.0 20 20
Apiospora_montagnei_NRRL_25634_v1.0 33 33
Magnaporthe_poae_ATCC_64411_22 28 28
Magnaporthe_grisea_70-15_ 25 25
Podospora_anserina_ 31 31
Sporotrichum_thermophile_ATCC_42464_ 18 18
Thielavia_terrestris_NRRL_8126_ 30 30
Chaetomium_globosum_CBS_148.51_ 24 24
Neurospora_tetrasperma_ 18 18
Neurospora_discreta_FGSC_8579_ 20 20
Neurospora_crassa_OR74A_ 20 20
Cryphonectria_parasitica_   (Chestnut blight fungus)   34 33
Verticillium_albo-atrum_VaMs.102_ 19 19
Verticillium_dahliae_VdLs.17_ 18 18
Acremonium_alcalophilumv_1.0 9 9
Glomerella_graminicola_22 18 18
Fusarium_graminearum_ 21 21
Nectria_haematococca_mpVI_ 23 23
Fusarium_oxysporum_f._sp._lycopersici_4286_ 25 25
Fusarium_verticillioides_7600_ 25 25
Trichoderma_asperellum_CBS_433.97_v1.0 22 22
Trichoderma_atroviride_ 22 22
Trichoderma_citrinoviride_v1.0 20 20
Trichoderma_reesei_1.2 18 18
Trichoderma_virens_Gv29-8_ 26 25
Trichoderma_longibrachiatum_ATCC_18648_v1.0 17 17
Trichoderma_harzianum_CBS_226.95_v1.0 27 26
Amorphotheca_resinae_v1.0   (Creosote fungus)   13 13
Botrytis_cinerea_B05.10_ 35 35
Sclerotinia_sclerotiorum_ 23 23
Blumeria_graminis_22 6 6
Didymella_exigua_CBS_183.55_v1.0 21 21
Leptosphaeria_maculans_22 14 14
Setosphaeria_turcica_v1.0 20 20
Cochliobolus_miyabeanus_ATCC_44560_v1.0 23 23
Cochliobolus_victoriae_FI3_v1.0 22 22
Cochliobolus_carbonum_26-R-13_v1.0 24 24
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   21 21
Alternaria_brassicicola_ 15 15
Cochliobolus_lunatus_m118_v2.0 20 20
Pyrenophora_teres_f._teres_22 22 22
Pyrenophora_tritici-repentis_ 18 18
Stagonospora_nodorum_ 24 24
Mycosphaerella_graminicola_IPO323_ 27 27
Zasmidium_cellare_ATCC_36951_v1.0 32 32
Dothistroma_septosporum 16 16
Septoria_musiva_v1.0 13 13
Mycosphaerella_fijiensis_CIRAD86_ 19 19
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 18 18
Paracoccidioides_brasiliensis_Pb18_ 6 6
Coccidioides_posadasii_RMSCC_3488_ 7 7
Coccidioides_immitis_RS_ 8 8
Ajellomyces_dermatitidis_SLH14081_ 7 7
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 6 6
Microsporum_canis_CBS_113480_ 10 10
Trichophyton_equinum_CBS_127.97_ 10 10
Trichophyton_verrucosum_HKI_0517_ 10 10
Arthroderma_benhamiae_CBS_112371_ 10 10
Trichophyton_tonsurans_CBS_112818_ 10 10
Trichophyton_rubrum_CBS_118892_ 10 10
Uncinocarpus_reesii_1704_ 7 7
Aspergillus_zonatus_v1.0 12 11
Penicillium_chrysogenum_Wisconsin_54-1255_ 11 11
Penicillium_chrysogenum_v1.0 10 10
Aspergillus_acidus_v1.0 12 12
Aspergillus_fumigatus_Af293 9 9
Aspergillus_brasiliensis_v1.0 16 16
Aspergillus_nidulans_FGSC_A4_ 11 11
Aspergillus_sydowii_v1.0 13 13
Aspergillus_versicolor_v1.0 13 13
Aspergillus_glaucus 7 7
Aspergillus_carbonarius_ITEM_5010_ 17 17
Neosartorya_fischeri_NRRL_181_ 10 10
Aspergillus_terreus_NIH2624_ 12 11
Aspergillus_tubingensis_v1.0 12 12
Aspergillus_wentii_v1.0 18 18
Aspergillus_oryzae_RIB40_ 15 15
Aspergillus_niger_22 15 15
Aspergillus_niger_ATCC_1015_ 8 8
Aspergillus_flavus_NRRL3357_ 17 17
Aspergillus_clavatus_NRRL_1_ 10 10
Penicillium_marneffei_ATCC_18224_ 38 38
Tuber_melanosporum_Mel28_22 5 5
Tuber_melanosporum_Vittad_   (Perigord truffle)   171 171
Hansenula_polymorpha_v2.0 5 5
Dekkera_bruxellensis_CBS_2499_v2.0 5 5
Pichia_membranifaciensv1.0 10 8
Candida_tanzawaensis_NRRL_Y-17324__v1.0 13 13
Candida_dubliniensis_CD36_ 15 15
Candida_tropicalis_MYA-3404_ 16 16
Candida_parapsilosis_ 23 23
Candida_albicans_SC5314 16 16
Lodderomyces_elongisporus_NRRL_YB-4239_ 13 12
Babjeviella_inositovora_NRRL_Y-12698_v1.0 13 13
Pichia_stipitis_CBS_6054_ 9 9
Candida_guilliermondii_ATCC_6260_ 16 16
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 10 10
Debaromyces_hansenii 9 9
Wickerhamomyces_anomalus 12 12
Pichia_pastoris_GS115_ 9 9
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 9 9
Yarrowia_lipolytica_CLIB122 42 42
Candida_lusitaniae_ATCC_42720_ 19 19
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 9 9
Vanderwaltozyma_polyspora_DSM_70294_ 7 7
Candida_glabrata_CBS138 15 15
Kluyveromyces_thermotolerans_CBS_6340 5 5
Lachancea_kluyveri_ 9 9
Kluyveromyces_waltii 6 6
Ashbya_gossypii_ATCC_10895_ 8 8
Zygosaccharomyces_rouxii_ 11 11
Saccharomyces_mikatae_MIT 17 17
Saccharomyces_paradoxus_MIT 13 12
Saccharomyces_cerevisiae_76   (Baker's yeast)   12 12
Saccharomyces_bayanus_MIT 21 21
Kluyveromyces_lactis 6 6
Schizosaccharomyces_cryophilus_OY26_22 5 5
Schizosaccharomyces_octosporus_yFS286_ 5 5
Schizosaccharomyces_japonicus_yFS275_ 9 9
Schizosaccharomyces_pombe   (Fission yeast)   13 13
Catenaria_anguillulae_PL171_v1.0 13 13
Allomyces_macrogynus_ATCC_38327_ 7 7
Spizellomyces_punctatus_DAOM_BR117_ 11 11
Dictyostelium_discoideum 24 24
Dictyostelium_purpureum_ 11 11
Entamoeba_dispar_1.2 1 1
Entamoeba_invadens_1.2 1 1
Entamoeba_histolytica_1 2 2
Selaginella_moellendorffii_ 77 76
Pinus_taeda   (Loblolly pine)   239 211
Picea_abies   (Norway spruce)   122 116
Eucalyptus_grandis_v201   (Rose gum)   134 134
Theobroma_cacao_B97-61/B2_v1   (Cacao)   509 507
Gossypium_raimondii_v221 161 161
Citrus_clementina_v165 120 120
Citrus_sinensis_v154   (Sweet orange)   163 163
Thellungiella_halophila_v173 85 85
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   115 114
Capsella_rubella_v183 77 77
Arabidopsis_lyrata_   (Lyrate rockcress)   82 81
Arabidopsis_thaliana_10   (Thale cress)   83 82
Carica_papaya_   (Papaya)   50 50
Medicago_truncatula_   (Barrel medic)   149 148
Phaseolus_vulgaris_v186   (French bean)   94 94
Glycine_max_v109   (Soybean)   234 234
Cucumis_sativus_v122   (Cucumber)   116 116
Fragaria_vesca_   (Wild strawberry)   111 108
Malus_domestica_v196   (Apple)   98 95
Prunus_persica_v139   (Peach)   115 115
Linum_usitatissimum_v200   (Flax)   161 156
Manihot_esculenta_v147   (Cassava)   106 106
Populus_trichocarpa_v156   (Black cottonwood)   112 112
Vitis_vinifera_   (Wine grape)   60 58
Mimulus_guttatus_v140   (Spotted monkey flower)   146 144
Solanum_lycopersicum_v.2.3   (Tomato)   106 104
Solanum_tuberosum_   (Potato)   163 161
Actinidia_chinensis_Hongyang_ 106 99
Aquilegia_coerulea_v195 101 101
Triticum_urartu_22 119 114
Triticum_aestivum_22   (Bread wheat)   214 214
Aegilops_tauschii_22 162 154
Brachypodium_distachyon_   (Stiff brome)   98 97
Oryza_barthii_22   (African wild rice)   147 120
Oryza_meridionalis_22 128 117
Oryza_glumaepatula_22 139 128
Oryza_glaberrima   (African rice)   113 113
Oryza_punctata_22 138 124
Oryza_nivara_22 164 142
Oryza_brachyantha_22   (Malo sina)   104 103
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1476 1474
Oryza_sativa_v193   (Rice)   1476 1474
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   124 118
Panicum_virgatum_v202   (Switchgrass)   250 250
Setaria_italica_v164   (Foxtail millet)   133 133
Zea_mays_subsp._mays_   (Maize)   137 137
Zea_mays_v181   (Maize)   157 156
Sorghum_bicolor_   (Sorghum)   153 136
Musa_balbisiana   (Balbis banana)   305 303
Musa_acuminata_22   (Wild Malaysian banana)   83 81
Amborella_trichopoda_22 93 89
Physcomitrella_patens 71 71
Coccomyxa_subellipsoidea_sp._C-169_v2 10 10
Asterochloris_sp._Cgr/DA1pho_v1.0 2 2
Chlorella_variabilis_sp._NC64A_ 4 4
Chlorella_vulgaris_ 9 9
Volvox_carteri_f._nagariensis_ 20 20
Volvox_carteri_v199 6 6
Chlamydomonas_reinhardtii_4.0 8 7
Ostreococcus_sp._RCC809_ 6 6
Ostreococcus_lucimarinus_CCE9901_ 7 7
Ostreococcus_tauri_ 6 6
Bathycoccus_prasinos_ 6 6
Micromonas_sp._RCC299_ 5 5
Micromonas_pusilla_CCMP1545_v3.0 5 5
Cyanidioschyzon_merolae_strain_10D_22 4 4
Cyanidioschyzon_merolae 4 4
Porphyridium_purpureum_02_2012 21 21
Thecamonas_trahens_ATCC_50062_ 13 12
Bigelowiella_natans_CCMP2755_22 29 28
Giardia_lamblia_2.3 3 3
Cyanophora_paradoxa_ 22 22
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Trypanosoma_vivax_ 1 1
Trypanosoma_cruzi_strain_CL_Brener 1 1
Trypanosoma_congolense_2.4 4 4
Trypanosoma_brucei_gambiense_v4.1 1 1
Trypanosoma_brucei_TREU927_v4.1 1 1
Ectocarpus_siliculosus 12 12
Aureococcus_anophagefferens_ 7 7
Albugo_laibachii_22 39 39
Pythium_iwayamai_DAOM_BR242034_22 27 26
Pythium_arrhenomanes_ATCC_12531_22 40 37
Pythium_ultimum_v1.7-2 35 35
Pythium_aphanidermatum_DAOM_BR444_22 33 33
Pythium_irregulare_DAOM_BR486_22 27 23
Pythium_vexans_DAOM_BR484_22 18 18
Phytophthora_ramorum_1.1   (Sudden oak death agent)   36 35
Phytophthora_sojae_1.1 147 146
Phytophthora_infestans_T30-4_ 114 114
Phytophthora_capsici_ 78 78
Hyaloperonospora_arabidopsidis_22 10 10
Phaeodactylum_tricornutumCCAP_1055/1 7 7
Fragilariopsis_cylindrus 17 17
Thalassiosira_pseudonana_CCMP1335 12 12
Perkinsus_marinus_ATCC_50983_ 160 160
Paramecium_tetraurelia_ 58 57
Tetrahymena_thermophila_SB210_1_ 106 104
Ichthyophthirius_multifiliis_strain_G5_ 17 17
Cryptosporidium_hominis 6 6
Cryptosporidium_muris 9 9
Cryptosporidium_parvum_Iowa_II 6 6
Neospora_caninum 8 8
Toxoplasma_gondii_VEG 8 8
Toxoplasma_gondii_ME49 8 8
Toxoplasma_gondii_GT1 8 8
Babesia_bovis_T2Bo_ 16 16
Theileria_parva__ 9 9
Theileria_annulata 9 9
Plasmodium_falciparum_3D7_ 13 13
Plasmodium_vivax_SaI-1_7.0 11 10
Plasmodium_knowlesi_strain_H_ 11 10
Plasmodium_yoelii_ssp._yoelii_1_ 15 15
Plasmodium_chabaudi_ 10 10
Plasmodium_berghei_ANKA_ 10 10
Symbiodinium_minutum_clade_B1_v1.2 102 96
Naegleria_gruberi_ 5 5
Trichomonas_vaginalis_ 2 2
Guillardia_theta_CCMP2712_v1.0_ 47 29
Emiliania_huxleyi_CCMP1516_ 14 14
Leptolyngbya_sp._PCC_7376 1 1
Pseudanabaena_sp._PCC_7367 2 2
Acaryochloris_marina_MBIC11017 5 3
Thermosynechococcus_sp._NK55 1 1
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_7502 2 2
Synechococcus_sp._PCC_6312 1 1
Microcoleus_sp._PCC_7113 3 3
Trichodesmium_erythraeum_IMS101 4 3
Geitlerinema_sp._PCC_7407 3 3
Cyanothece_sp._PCC_8802 4 4
Gloeocapsa_sp._PCC_7428 2 2
Halothece_sp._PCC_7418 2 2
Microcystis_aeruginosa_NIES-843 3 3
Gloeobacter_violaceus_PCC_7421 1 1
Rivularia_sp._PCC_7116 4 4
Calothrix_sp._PCC_7507 1 1
Anabaena_variabilis_ATCC_29413 3 3
'Nostoc_azollae'_0708 1 1
Nostoc_sp._PCC_7107 5 5
Nostoc_punctiforme_PCC_73102 4 4
Nostoc_sp._PCC_7120 4 4
Nostoc_sp._PCC_7524 3 3
Anabaena_sp._90 3 3
Mycoplasma_mobile_163K 1 1
Ilumatobacter_coccineus 1 1
Catenulispora_acidiphila_DSM_44928 1 1
Streptosporangium_roseum_DSM_43021 1 1
Microlunatus_phosphovorus_NM-1 1 1
Actinoplanes_sp._SE50/110 2 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 1 1
Intrasporangium_calvum_DSM_43043 1 1
Micrococcus_luteus_NCTC_2665 1 1
Roseiflexus_sp._RS-1 1 1
Roseiflexus_castenholzii_DSM_13941 1 1
Chloroflexus_sp._MS-G 1 1
Chloroflexus_sp._Y-400-fl 1 1
Chloroflexus_aggregans_DSM_9485 1 1
Chloroflexus_aurantiacus_J-10-fl 1 1
Deinococcus_proteolyticus_MRP 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 2 2
Symbiobacterium_thermophilum_IAM_14863 1 1
Desulfotomaculum_reducens_MI-1 1 1
Desulfotomaculum_acetoxidans_DSM_771 1 1
Desulfotomaculum_kuznetsovii_DSM_6115 1 1
Alkaliphilus_metalliredigens_QYMF 1 1
Clostridium_beijerinckii_NCIMB_8052 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Paenibacillus_terrae_HPL-003 2 2
Paenibacillus_polymyxa_M1 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 1 1
Geobacillus_sp._WCH70 2 2
Bacillus_cellulosilyticus_DSM_2522 1 1
Pelodictyon_phaeoclathratiforme_BU-1 1 1
Chlorobium_chlorochromatii_CaD3 1 1
Chlorobium_phaeobacteroides_DSM_266 1 1
Chlorobium_phaeovibrioides_DSM_265 1 1
Chloroherpeton_thalassium_ATCC_35110 1 1
Haliscomenobacter_hydrossis_DSM_1100 5 4
Niastella_koreensis_GR20-10 4 2
Chitinophaga_pinensis_DSM_2588 5 5
Flexibacter_litoralis_DSM_6794 1 1
Belliella_baltica_DSM_15883 2 2
Cyclobacterium_marinum_DSM_745 1 1
Marivirga_tractuosa_DSM_4126 3 3
Dyadobacter_fermentans_DSM_18053 2 2
Spirosoma_linguale_DSM_74 3 3
Runella_slithyformis_DSM_19594 1 1
Paludibacter_propionicigenes_WB4 2 2
Odoribacter_splanchnicus_DSM_20712 1 1
Bacteroides_sp._CF50 2 1
Prevotella_ruminicola_23 1 1
Alistipes_finegoldii_DSM_17242 2 2
Bacteroides_salanitronis_DSM_18170 2 2
Bacteroides_helcogenes_P_36-108 2 2
Bacteroides_fragilis_YCH46 2 2
Pedobacter_saltans_DSM_12145 2 2
Solitalea_canadensis_DSM_3403 2 2
Pedobacter_heparinus_DSM_2366 1 1
Sphingobacterium_sp._21 5 5
Fluviicola_taffensis_DSM_16823 4 3
Owenweeksia_hongkongensis_DSM_17368 1 1
Zunongwangia_profunda_SM-A87 4 4
Krokinobacter_sp._4H-3-7-5 3 3
Gramella_forsetii_KT0803 3 3
Lacinutrix_sp._5H-3-7-4 3 3
Maribacter_sp._HTCC2170 1 1
Robiginitalea_biformata_HTCC2501 2 2
Croceibacter_atlanticus_HTCC2559 3 3
Aequorivita_sublithincola_DSM_14238 3 3
Zobellia_galactanivorans 3 3
Muricauda_ruestringensis_DSM_13258 2 2
Cellulophaga_algicola_DSM_14237 3 3
Cellulophaga_lytica_DSM_7489 4 4
Flavobacteriaceae_bacterium_3519-10 1 1
Polaribacter_sp._MED152 4 4
Capnocytophaga_canimorsus_Cc5 1 1
Capnocytophaga_ochracea_DSM_7271 1 1
Flavobacterium_indicum_GPTSA100-9 2 2
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_branchiophilum_FL-15 1 1
Flavobacterium_columnare_ATCC_49512 1 1
Flavobacterium_johnsoniae_UW101 3 3
Phycisphaera_mikurensis_NBRC_102666 2 2
Isosphaera_pallida_ATCC_43644 1 1
Planctomyces_brasiliensis_DSM_5305 1 1
Rhodopirellula_baltica_SH_1 2 2
Methylacidiphilum_infernorum_V4 3 3
Coraliomargarita_akajimensis_DSM_45221 2 2
Opitutus_terrae_PB90-1 1 1
Akkermansia_muciniphila_ATCC_BAA-835 1 1
Turneriella_parva_DSM_21527 5 4
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Treponema_primitia_ZAS-2 4 4
Treponema_brennaborense_DSM_12168 2 1
Treponema_denticola_ATCC_35405 4 2
Desulfurispirillum_indicum_S5 1 1
Denitrovibrio_acetiphilus_DSM_12809 1 1
Hydrogenobaculum_sp._SN 1 1
Hydrogenobaculum_sp._HO 1 1
Hydrogenobaculum_sp._Y04AAS1 3 2
Candidatus_Chloracidobacterium_thermophilum_B 3 2
Candidatus_Solibacter_usitatus_Ellin6076 1 1
Granulicella_mallensis_MP5ACTX8 1 1
Candidatus_Koribacter_versatilis_Ellin345 3 2
Terriglobus_roseus_DSM_18391 2 1
Acidobacterium_capsulatum_ATCC_51196 2 1
Sebaldella_termitidis_ATCC_33386 1 1
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 1 1
Candidatus_Saccharimonas_aalborgensis 1 1
Bacteriovorax_marinus_SJ 1 1
Arcobacter_sp._L 1 1
Arcobacter_nitrofigilis_DSM_7299 1 1
Arcobacter_butzleri_RM4018 1 1
Sulfurimonas_denitrificans_DSM_1251 1 1
Syntrophus_aciditrophicus_SB 1 1
Desulfomonile_tiedjei_DSM_6799 1 1
Desulfurivibrio_alkaliphilus_AHT2 1 1
Desulfotalea_psychrophila_LSv54 3 3
Desulfatibacillum_alkenivorans_AK-01 2 2
Desulfobacterium_autotrophicum_HRM2 1 1
Desulfococcus_oleovorans_Hxd3 1 1
Desulfovibrio_piezophilus 1 1
Desulfovibrio_salexigens_DSM_2638 2 2
Geobacter_daltonii_FRC-32 2 2
Geobacter_sp._M21 3 3
Geobacter_uraniireducens_Rf4 2 2
Geobacter_bemidjiensis_Bem 2 2
Pelobacter_carbinolicus_DSM_2380 2 2
Myxococcus_xanthus_DK_1622 1 1
Myxococcus_fulvus_HW-1 1 1
Dechloromonas_aromatica_RCB 1 1
Thauera_sp._MZ1T 2 2
Azoarcus_sp._KH32C 1 1
Azoarcus_sp._BH72 2 2
Aromatoleum_aromaticum_EbN1 2 2
Dechlorosoma_suillum_PS 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1 1
Methylibium_petroleiphilum_PM1 2 2
Thiomonas_arsenitoxydans 1 1
Thiomonas_intermedia_K12 1 1
Rubrivivax_gelatinosus_IL144 1 1
Leptothrix_cholodnii_SP-6 1 1
Burkholderia_phymatum_STM815 2 2
Burkholderia_thailandensis_E264 1 1
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_glumae_BGR1 1 1
Verminephrobacter_eiseniae_EF01-2 1 1
Alicycliphilus_denitrificans_K601 3 3
Ramlibacter_tataouinensis_TTB310 1 1
Delftia_sp._Cs1-4 2 2
Delftia_acidovorans_SPH-1 2 2
Polaromonas_sp._JS666 1 1
Polaromonas_naphthalenivorans_CJ2 1 1
Variovorax_paradoxus_S110 2 2
Rhodoferax_ferrireducens_T118 1 1
Acidovorax_ebreus_TPSY 1 1
Acidovorax_sp._KKS102 1 1
Acidovorax_sp._JS42 2 2
Acidovorax_citrulli_AAC00-1 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Comamonas_testosteroni_CNB-2 2 2
Herminiimonas_arsenicoxydans 1 1
Collimonas_fungivorans_Ter331 1 1
Janthinobacterium_sp._Marseille 1 1
Thiobacillus_denitrificans_ATCC_25259 2 2
Nitrosomonas_sp._Is79A3 1 1
Nitrosomonas_eutropha_C91 1 1
Nitrosomonas_europaea_ATCC_19718 1 1
Sideroxydans_lithotrophicus_ES-1 2 2
Methylotenera_versatilis_301 2 2
Methylotenera_mobilis_JLW8 2 2
Methylovorus_sp._MP688 2 2
Methylovorus_glucosetrophus_SIP3-4 2 2
Methylobacillus_flagellatus_KT 2 2
Magnetococcus_marinus_MC-1 1 1
Parvularcula_bermudensis_HTCC2503 2 2
Asticcacaulis_excentricus_CB_48 5 4
Brevundimonas_subvibrioides_ATCC_15264 6 4
Caulobacter_sp._K31 6 4
Caulobacter_crescentus_NA1000 2 2
Caulobacter_segnis_ATCC_21756 4 3
Phenylobacterium_zucineum_HLK1 5 3
Erythrobacter_litoralis_HTCC2594 4 3
Sphingopyxis_alaskensis_RB2256 4 3
Novosphingobium_sp._PP1Y 4 3
Novosphingobium_aromaticivorans_DSM_12444 2 1
Sphingobium_sp._SYK-6 5 4
Sphingobium_japonicum_UT26S 4 3
Sphingobium_chlorophenolicum_L-1 3 2
Sphingomonas_sp._MM-1 5 4
Sphingomonas_wittichii_RW1 2 1
Maricaulis_maris_MCS10 4 3
Hirschia_baltica_ATCC_49814 4 3
Hyphomonas_neptunium_ATCC_15444 3 3
Dinoroseobacter_shibae_DFL_12 2 2
Phaeobacter_gallaeciensis_2.10 2 2
Pseudovibrio_sp._FO-BEG1 2 2
Jannaschia_sp._CCS1 1 1
Ruegeria_sp._TM1040 2 2
Ruegeria_pomeroyi_DSS-3 1 1
Ketogulonicigenium_vulgare_Y25 1 1
Ketogulonigenium_vulgarum_WSH-001 1 1
Roseobacter_litoralis_Och_149 2 2
Roseobacter_denitrificans_OCh_114 2 2
Rhodobacter_sphaeroides_ATCC_17029 1 1
Rhodobacter_capsulatus_SB_1003 1 1
Paracoccus_denitrificans_PD1222 1 1
Azospirillum_brasilense_Sp245 1 1
Gluconacetobacter_xylinus_NBRC_3288 3 2
Granulibacter_bethesdensis_CGDNIH1 4 3
Gluconacetobacter_diazotrophicus_PAl_5 2 1
Gluconobacter_oxydans_621H 5 3
Acetobacter_pasteurianus_IFO_3283-01 2 1
Polymorphum_gilvum_SL003B-26A1 2 2
Neorickettsia_sennetsu_str._Miyayama 1 1
Neorickettsia_risticii_str._Illinois 1 1
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 1 1
Ehrlichia_chaffeensis_str._Arkansas 1 1
Ehrlichia_canis_str._Jake 1 1
Ehrlichia_ruminantium_str._Gardel 1 1
Anaplasma_phagocytophilum_HZ 1 1
Anaplasma_marginale_str._Florida 1 1
Anaplasma_centrale_str._Israel 1 1
Rickettsia_bellii_OSU_85-389 1 1
Rickettsia_canadensis_str._McKiel 1 1
Rickettsia_typhi_str._Wilmington 1 1
Rickettsia_prowazekii_str._BuV67-CWPP 1 1
Rickettsia_philipii_str._364D 1 1
Rickettsia_heilongjiangensis_054 1 1
Rickettsia_peacockii_str._Rustic 1 1
Rickettsia_felis_URRWXCal2 1 1
Rickettsia_slovaca_13-B 1 1
Rickettsia_parkeri_str._Portsmouth 1 1
Rickettsia_massiliae_MTU5 1 1
Rickettsia_japonica_YH 1 1
Rickettsia_africae_ESF-5 1 1
Rickettsia_rhipicephali_str._3-7-female6-CWPP 1 1
Rickettsia_montanensis_str._OSU_85-930 1 1
Candidatus_Rickettsia_amblyommii_str._GAT-30V 1 1
Rickettsia_australis_str._Cutlack 1 1
Rickettsia_akari_str._Hartford 1 1
Rickettsia_rickettsii_str._'Sheila_Smith' 1 1
Rickettsia_conorii_str._Malish_7 1 1
Starkeya_novella_DSM_506 1 1
Xanthobacter_autotrophicus_Py2 1 1
Azorhizobium_caulinodans_ORS_571 3 3
Methylobacterium_chloromethanicum_CM4 1 1
Methylobacterium_extorquens_AM1 1 1
Methylobacterium_sp._4-46 2 2
Methylobacterium_populi_BJ001 1 1
Methylobacterium_nodulans_ORS_2060 3 3
Methylobacterium_radiotolerans_JCM_2831 2 2
Parvibaculum_lavamentivorans_DS-1 1 1
Ochrobactrum_anthropi_ATCC_49188 2 2
Brucella_microti_CCM_4915 1 1
Brucella_pinnipedialis_B2/94 1 1
Brucella_suis_ATCC_23445 1 1
Brucella_melitensis_ATCC_23457 1 1
Brucella_ovis_ATCC_25840 1 1
Brucella_abortus_S19 1 1
Sinorhizobium_fredii_NGR234 2 2
Sinorhizobium_medicae_WSM419 2 2
Sinorhizobium_meliloti_AK83 1 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 2 2
Rhizobium_etli_CIAT_652 2 2
Rhizobium_leguminosarum_bv._viciae_3841 2 2
Agrobacterium_tumefaciens_str._C58 2 2
Agrobacterium_radiobacter_K84 2 2
Agrobacterium_sp._H13-3 2 2
Agrobacterium_vitis_S4 3 3
Mesorhizobium_sp._BNC1 1 1
Mesorhizobium_opportunistum_WSM2075 2 2
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2 2
Mesorhizobium_loti_MAFF303099 2 2
Methylocella_silvestris_BL2 1 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1 1
Pelagibacterium_halotolerans_B2 1 1
Rhodomicrobium_vannielii_ATCC_17100 3 3
Hyphomicrobium_sp._MC1 2 2
Hyphomicrobium_denitrificans_ATCC_51888 2 2
Oligotropha_carboxidovorans_OM4 2 2
Rhodopseudomonas_palustris_BisA53 2 2
Nitrobacter_winogradskyi_Nb-255 2 2
Nitrobacter_hamburgensis_X14 2 2
Bradyrhizobium_japonicum_USDA_110 2 2
Bradyrhizobium_sp._ORS_278 2 2
Methylocystis_sp._SC2 2 1
Saccharophagus_degradans_2-40 6 6
Teredinibacter_turnerae_T7901 5 5
Cellvibrio_japonicus_Ueda107 7 7
Oceanimonas_sp._GK1 3 3
Tolumonas_auensis_DSM_9187 2 2
Aeromonas_veronii_B565 4 4
Aeromonas_salmonicida_subsp._salmonicida_A449 4 4
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 3 3
Aliivibrio_salmonicida_LFI1238 5 5
Vibrio_fischeri_MJ11 5 5
Vibrio_sp._Ex25 7 4
Vibrio_harveyi_ATCC_BAA-1116 7 4
Vibrio_parahaemolyticus_RIMD_2210633 7 4
Vibrio_splendidus_LGP32 7 4
Vibrio_anguillarum_775 3 3
Vibrio_furnissii_NCTC_11218 3 3
Vibrio_vulnificus_MO6-24/O 3 3
Vibrio_cholerae_O395 3 3
Photobacterium_profundum_SS9 7 4
Psychromonas_ingrahamii_37 1 1
Psychromonas_sp._CNPT3 1 1
Idiomarina_loihiensis_L2TR 2 2
Ferrimonas_balearica_DSM_9799 4 4
Shewanella_piezotolerans_WP3 3 2
Shewanella_loihica_PV-4 5 4
Shewanella_halifaxensis_HAW-EB4 4 3
Shewanella_sediminis_HAW-EB3 5 4
Shewanella_denitrificans_OS217 7 5
Shewanella_pealeana_ATCC_700345 4 3
Shewanella_baltica_OS185 1 1
Shewanella_woodyi_ATCC_51908 4 3
Shewanella_sp._MR-4 3 2
Shewanella_amazonensis_SB2B 4 3
Shewanella_violacea_DSS12 3 2
Shewanella_frigidimarina_NCIMB_400 4 3
Colwellia_psychrerythraea_34H 2 2
Pseudoalteromonas_sp._SM9913 1 1
Pseudoalteromonas_atlantica_T6c 3 3
Pseudoalteromonas_haloplanktis_TAC125 1 1
Glaciecola_sp._4H-3-7+YE-5 3 3
Glaciecola_nitratireducens_FR1064 2 2
Marinobacter_adhaerens_HP15 3 3
Marinobacter_sp._BSs20148 3 3
Marinobacter_hydrocarbonoclasticus_ATCC_49840 3 3
Marinobacter_aquaeolei_VT8 4 4
Alteromonas_sp._SN2 4 4
Alteromonas_macleodii_str._'Deep_ecotype' 4 4
Kangiella_koreensis_DSM_16069 2 2
Hahella_chejuensis_KCTC_2396 3 3
Alcanivorax_borkumensis_SK2 3 3
Marinomonas_posidonica_IVIA-Po-181 1 1
Marinomonas_sp._MWYL1 2 2
Marinomonas_mediterranea_MMB-1 1 1
Chromohalobacter_salexigens_DSM_3043 2 2
Halomonas_elongata_DSM_2581 5 5
Methylomicrobium_alcaliphilum 5 5
Methylomonas_methanica_MC09 2 2
Methylococcus_capsulatus_str._Bath 2 2
Dichelobacter_nodosus_VCS1703A 1 1
Rhodanobacter_denitrificans 1 1
Frateuria_aurantia_DSM_6220 2 2
Stenotrophomonas_maltophilia_K279a 1 1
Alkalilimnicola_ehrlichii_MLHE-1 2 2
Thioalkalivibrio_sulfidophilus_HL-EbGr7 3 3
Thioalkalivibrio_sp._K90mix 2 2
Halorhodospira_halophila_SL1 2 2
Allochromatium_vinosum_DSM_180 4 4
Thiocystis_violascens_DSM_198 5 5
Nitrosococcus_watsonii_C-113 4 4
Nitrosococcus_halophilus_Nc4 5 5
Nitrosococcus_oceani_ATCC_19707 4 4
Coxiella_burnetii_Dugway_5J108-111 2 2
Legionella_longbeachae_NSW150 1 1
Legionella_pneumophila_str._Corby 2 2
gamma_proteobacterium_HdN1 2 2
Photorhabdus_asymbiotica 3 3
Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1
Xenorhabdus_nematophila_ATCC_19061 1 1
Rahnella_sp._Y9602 1 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1 1
Dickeya_zeae_Ech1591 1 1
Azotobacter_vinelandii_DJ 3 3
Pseudomonas_sp._TKP 3 3
Pseudomonas_sp._UW4 5 5
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 4 4
Pseudomonas_entomophila_L48 4 4
Pseudomonas_syringae_pv._tomato_str._DC3000 4 4
Pseudomonas_stutzeri_A1501 6 6
Pseudomonas_fulva_12-X 5 5
Pseudomonas_putida_F1 4 4
Pseudomonas_protegens_Pf-5 4 4
Pseudomonas_fluorescens_SBW25 3 3
Pseudomonas_mendocina_ymp 5 5
Pseudomonas_aeruginosa_UCBPP-PA14 6 6
Pseudomonas_sp._VLB120 4 4
Methylophaga_sp._JAM1 4 4
Cycloclasticus_sp._P1 3 3
Thiomicrospira_crunogena_XCL-2 2 2
Thioalkalimicrobium_cyclicum_ALM1 1 1
Francisella_sp._TX077308 2 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 2 1
Francisella_tularensis_subsp._tularensis_WY96-3418 1 1
Francisella_cf._novicida_3523 1 1
Francisella_novicida_U112 1 1
Candidatus_Caldiarchaeum_subterraneum 1 1
Ignisphaera_aggregans_DSM_17230 6 6
Desulfurococcus_fermentans_DSM_16532 1 1
Acidianus_hospitalis_W1 3 3
Sulfolobus_tokodaii_str._7 1 1
Sulfolobus_islandicus_Y.N.15.51 1 1
Thermofilum_sp._1910b 2 2
Thermofilum_pendens_Hrk_5 3 3
Vulcanisaeta_moutnovskia_768-28 4 4
Vulcanisaeta_distributa_DSM_14429 9 9
Caldivirga_maquilingensis_IC-167 3 3
Pyrobaculum_sp._1860 5 5
Pyrobaculum_calidifontis_JCM_11548 3 3
Pyrobaculum_arsenaticum_DSM_13514 3 3
Pyrobaculum_oguniense_TE7 4 4
Pyrobaculum_aerophilum_str._IM2 3 3
Pyrobaculum_islandicum_DSM_4184 1 1
Thermoproteus_uzoniensis_768-20 4 4
halophilic_archaeon_DL31 1 1
Methanococcoides_burtonii_DSM_6242 1 1
Methanosarcina_acetivorans_C2A 1 1
Methanohalophilus_mahii_DSM_5219 1 1
Methanopyrus_kandleri_AV19 1 1
Salinarchaeum_sp._Harcht-Bsk1 2 2
Halopiger_xanaduensis_SH-6 1 1
Haloterrigena_turkmenica_DSM_5511 1 1
Natrinema_sp._J7-2 1 1
Natrialba_magadii_ATCC_43099 1 1
Halorubrum_lacusprofundi_ATCC_49239 2 2
Halogeometricum_borinquense_DSM_11551 1 1
Haloferax_mediterranei_ATCC_33500 1 1
Haloferax_volcanii_DS2 1 1
Halomicrobium_mukohataei_DSM_12286 2 2
Natronomonas_pharaonis_DSM_2160 1 1
Haloarcula_hispanica_ATCC_33960 1 1
Haloarcula_marismortui_ATCC_43049 1 1
Halalkalicoccus_jeotgali_B3 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   71 71
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   14 14
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   4 4
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   12 12
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   27 26
Cryptococcus_neoformans_var._grubii_H99_ 11 11
Cryptococcus_neoformans_B-3501A_ 18 18
Cryptococcus_neoformans_JEC21_ 9 9
Paracoccidioides_brasiliensis_Pb01_ 6 6
Paracoccidioides_brasiliensis_Pb03_ 5 5
Coccidioides_posadasii_str._Silveira_ 12 12
Coccidioides_immitis_RMSCC_3703_ 7 7
Coccidioides_immitis_RMSCC_2394_ 7 7
Coccidioides_immitis_H538.4_ 7 7
Ajellomyces_dermatitidis_ER-3_ 7 7
Histoplasma_capsulatum_H143 6 6
Histoplasma_capsulatum_H88 6 6
Histoplasma_capsulatum_G186AR 6 6
Aspergillus_fumigatus_A1163_ 9 9
Candida_albicans_WO-1_ 16 16
Saccharomyces_cerevisiae_UC5 7 7
Saccharomyces_cerevisiae_PW5 10 10
Saccharomyces_cerevisiae_FL100 7 7
Saccharomyces_cerevisiae_CLIB382 1 1
Saccharomyces_cerevisiae_CLIB324 5 5
Saccharomyces_cerevisiae_CBS7960 8 8
Saccharomyces_cerevisiae_YJM269 6 6
Saccharomyces_cerevisiae_T7 9 9
Saccharomyces_cerevisiae_FostersB 9 9
Saccharomyces_cerevisiae_FostersO 7 7
Saccharomyces_cerevisiae_VL3 8 8
Saccharomyces_cerevisiae_Vin13 9 9
Saccharomyces_cerevisiae_LalvinQA23 9 9
Saccharomyces_cerevisiae_AWRI796 9 9
Saccharomyces_cerevisiae_Sigma1278b 10 10
Saccharomyces_cerevisiae_W303 11 11
Saccharomyces_cerevisiae_JAY291 9 9
Saccharomyces_cerevisiae_AWRI1631 6 6
Saccharomyces_cerevisiae_YPS163 4 4
Saccharomyces_cerevisiae_M22 3 3
Saccharomyces_cerevisiae_T73 2 2
Saccharomyces_cerevisiae_CLIB215 7 7
Saccharomyces_cerevisiae_Y10 3 3
Saccharomyces_cerevisiae_YJM789_ 9 9
Saccharomyces_cerevisiae_YJM789 8 8
Saccharomyces_cerevisiae_RM11-1a 9 9
Saccharomyces_cerevisiae_RM11-1a_ 10 10
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   13 13
Schizosaccharomyces_pombe_972h-_ 13 13
Batrachochytrium_dendrobatidis_JEL423_ 112 112
Batrachochytrium_dendrobatidis_JAM81_ 108 108
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   347 346
Hordeum_vulgare_22   (Domesticated barley)   157 156
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   331 326
Trypanosoma_brucei_Lister_427_v4.1 1 1
Neospora_caninum_Nc-Liverpool_6.2 8 8
Plasmodium_falciparum_HB3_ 12 12
Plasmodium_falciparum_Dd2_ 8 8
Chroococcidiopsis_thermalis_PCC_7203 1 1
Chamaesiphon_minutus_PCC_6605 3 3
Cyanobium_gracile_PCC_6307 1 1
Dactylococcopsis_salina_PCC_8305 2 2
Synechococcus_sp._JA-2-3B'a(2-13) 1 1
Synechococcus_sp._JA-3-3Ab 1 1
Synechococcus_sp._RCC307 2 1
Synechococcus_sp._WH_8102 1 1
Synechococcus_sp._PCC_7002 1 1
Crinalium_epipsammum_PCC_9333 3 3
Oscillatoria_nigro-viridis_PCC_7112 6 6
Oscillatoria_acuminata_PCC_6304 4 4
Arthrospira_platensis_NIES-39 4 3
Cyanothece_sp._PCC_7822 6 5
Cyanothece_sp._PCC_7425 2 2
Cyanothece_sp._PCC_7424 7 6
Cyanothece_sp._ATCC_51142 3 3
Cyanothece_sp._PCC_8801 4 4
Cyanobacterium_aponinum_PCC_10605 1 1
Cyanobacterium_stanieri_PCC_7202 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 9 6
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 2 2
Stanieria_cyanosphaera_PCC_7437 2 2
Calothrix_parietina_Calothrix_sp._PCC_6303 5 4
Cylindrospermum_stagnale_PCC_7417 4 4
Anabaena_cylindrica_PCC_7122 3 3
Mycobacterium_sp._JDM601 1 1
Mycobacterium_canettii_CIPT_140060008 1 1
Mycobacterium_tuberculosis_CCDC5180 1 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1 1
Chthonomonas_calidirosea_T49 2 2
Desulfotomaculum_gibsoniae_DSM_7213 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1 1
Clostridium_pasteurianum_BC1 1 1
Clostridium_botulinum_E3_str._Alaska_E43 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1 1
Paenibacillus_polymyxa_SC2 1 1
Geobacillus_sp._C56-T3 1 1
Echinicola_vietnamensis_DSM_17526 1 1
Alistipes_shahii_WAL_8301 1 1
Bacteroides_fragilis_638R 3 3
Bacteroides_fragilis_NCTC_9343 2 2
Nonlabens_dokdonensis_DSW-6 3 3
Psychroflexus_torquis_ATCC_700755 2 2
Singulisphaera_acidiphila_DSM_18658 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Lai_str._56601 1 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Treponema_pedis_str._T_A4 4 3
Arcobacter_butzleri_7h1h 1 1
Arcobacter_butzleri_ED-1 1 1
Desulfobacula_toluolica_Tol2 2 2
Desulfovibrio_desulfuricans_ND132 1 1
Geobacter_sp._M18 2 2
Sorangium_cellulosum_So0157-2 1 1
Myxococcus_stipitatus_DSM_14675 1 1
Burkholderia_sp._YI23 3 2
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_pseudomallei_MSHR305 1 1
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_pseudomallei_K96243 1 1
Alicycliphilus_denitrificans_BC 1 1
Variovorax_paradoxus_B4 1 1
Variovorax_paradoxus_EPS 1 1
Nitrosomonas_sp._AL212 3 3
Sulfuricella_denitrificans_skB26 2 2
Caulobacter_crescentus_CB15 2 2
Zymomonas_mobilis_subsp._mobilis_CP4 1 1
Phaeobacter_gallaeciensis_DSM_17395 1 1
Phaeobacter_gallaeciensis_DSM_26640 1 1
Leisingera_methylohalidivorans_DSM_14336 2 2
Octadecabacter_antarcticus_307 3 3
Octadecabacter_arcticus_238 3 3
Rhodobacter_sphaeroides_KD131 1 1
Rhodobacter_sphaeroides_ATCC_17025 1 1
Rhodobacter_sphaeroides_2.4.1 1 1
Paracoccus_aminophilus_JCM_7686 2 2
Gluconacetobacter_diazotrophicus_PAl_5 2 1
Gluconobacter_oxydans_H24 6 3
Acetobacter_pasteurianus_386B 2 1
Acetobacter_pasteurianus_IFO_3283-12 2 1
Acetobacter_pasteurianus_IFO_3283-01-42C 2 1
Acetobacter_pasteurianus_IFO_3283-32 2 1
Acetobacter_pasteurianus_IFO_3283-26 2 1
Acetobacter_pasteurianus_IFO_3283-22 2 1
Acetobacter_pasteurianus_IFO_3283-07 2 1
Acetobacter_pasteurianus_IFO_3283-03 2 1
Wolbachia_endosymbiont_of_Drosophila_melanogaster 1 1
Wolbachia_endosymbiont_strain_TRS_of_Brugia_malayi 1 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 1 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 1 1
Ehrlichia_muris_AS145 1 1
Ehrlichia_ruminantium_str._Welgevonden 1 1
Ehrlichia_ruminantium_str._Welgevonden 1 1
Anaplasma_phagocytophilum_str._Dog2 1 1
Anaplasma_phagocytophilum_str._HZ2 1 1
Anaplasma_phagocytophilum_str._JM 1 1
Anaplasma_marginale_str._Gypsy_Plains 1 1
Anaplasma_marginale_str._St._Maries 1 1
Rickettsia_bellii_RML369-C 1 1
Rickettsia_canadensis_str._CA410 1 1
Rickettsia_typhi_str._B9991CWPP 1 1
Rickettsia_typhi_str._TH1527 1 1
Rickettsia_prowazekii_str._Breinl 1 1
Rickettsia_prowazekii_str._NMRC_Madrid_E 1 1
Rickettsia_prowazekii_str._RpGvF24 1 1
Rickettsia_prowazekii_str._GvV257 1 1
Rickettsia_prowazekii_str._Dachau 1 1
Rickettsia_prowazekii_str._Katsinyian 1 1
Rickettsia_prowazekii_str._Chernikova 1 1
Rickettsia_prowazekii_Rp22 1 1
Rickettsia_prowazekii_str._Madrid_E 1 1
Rickettsia_slovaca_str._D-CWPP 1 1
Rickettsia_massiliae_str._AZT80 1 1
Rickettsia_rickettsii_str._Arizona 1 1
Rickettsia_rickettsii_str._Brazil 1 1
Rickettsia_rickettsii_str._Hauke 1 1
Rickettsia_rickettsii_str._Colombia 1 1
Rickettsia_rickettsii__str._Hlp#2 1 1
Rickettsia_rickettsii_str._Hino 1 1
Rickettsia_rickettsii_str._Iowa 1 1
Methylobacterium_extorquens_DM4 1 1
Methylobacterium_extorquens_PA1 1 1
Brucella_ceti_TE10759-12 1 1
Brucella_ceti_TE28753-12 1 1
Brucella_canis_HSK_A52141 1 1
Brucella_suis_VBI22 1 1
Brucella_suis_1330 1 1
Brucella_suis_1330 1 1
Brucella_melitensis_NI 1 1
Brucella_melitensis_M5-90 1 1
Brucella_melitensis_M28 1 1
Brucella_melitensis_bv._1_str._16M 1 1
Brucella_abortus_A13334 1 1
Brucella_melitensis_biovar_Abortus_2308 1 1
Brucella_abortus_bv._1_str._9-941 1 1
Sinorhizobium_fredii_USDA_257 2 2
Sinorhizobium_fredii_HH103 2 2
Sinorhizobium_meliloti_2011 1 1
Sinorhizobium_meliloti_GR4 1 1
Sinorhizobium_meliloti_Rm41 1 1
Sinorhizobium_meliloti_SM11 1 1
Sinorhizobium_meliloti_BL225C 1 1
Sinorhizobium_meliloti_1021 1 1
Rhizobium_etli_CFN_42 2 2
Rhizobium_etli_bv._mimosae_str._Mim1 2 2
Rhizobium_tropici_CIAT_899 3 3
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2 2
Rhizobium_leguminosarum_bv._trifolii_WSM1325 2 2
Mesorhizobium_australicum_WSM2073 2 2
Hyphomicrobium_nitrativorans_NL23 3 3
Hyphomicrobium_denitrificans_1NES1 2 2
Oligotropha_carboxidovorans_OM5 2 2
Oligotropha_carboxidovorans_OM5 2 2
Rhodopseudomonas_palustris_DX-1 2 2
Rhodopseudomonas_palustris_TIE-1 2 2
Rhodopseudomonas_palustris_HaA2 2 2
Rhodopseudomonas_palustris_BisB5 2 2
Rhodopseudomonas_palustris_BisB18 2 2
Rhodopseudomonas_palustris_CGA009 2 2
Bradyrhizobium_sp._S23321 2 2
Bradyrhizobium_sp._BTAi1 2 2
Bradyrhizobium_oligotrophicum_S58 3 3
Bradyrhizobium_japonicum_USDA_6 2 2
Simiduia_agarivorans_SA1_=_DSM_21679 4 4
Aeromonas_hydrophila_ML09-119 3 3
Vibrio_fischeri_ES114 4 4
Vibrio_sp._EJY3 7 4
Vibrio_parahaemolyticus_BB22OP 7 4
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 7 4
Vibrio_anguillarum_Listonella_anguillarum_M3 3 3
Vibrio_nigripulchritudo_VibrioScope 5 5
Vibrio_vulnificus_CMCP6 3 3
Vibrio_vulnificus_YJ016 3 3
Vibrio_cholerae_LMA3984-4 3 3
Vibrio_cholerae_M66-2 3 3
Vibrio_cholerae_O395 3 3
Vibrio_cholerae_IEC224 3 3
Vibrio_cholerae_O1_str._2010EL-1786 3 3
Vibrio_cholerae_MJ-1236 3 3
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 3 3
Idiomarina_loihiensis_GSL_199 2 2
Shewanella_sp._ANA-3 3 2
Shewanella_baltica_BA175 1 1
Shewanella_baltica_OS678 1 1
Shewanella_baltica_OS117 1 1
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 1 1
Shewanella_baltica_OS155 1 1
Shewanella_sp._MR-7 3 2
Glaciecola_psychrophila_170 3 3
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 4 4
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 4 4
Alteromonas_macleodii_str._'Ionian_Sea_U8' 4 4
Alteromonas_macleodii_str._'Ionian_Sea_U7' 4 4
Alteromonas_macleodii_str._'Ionian_Sea_U4' 4 4
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 4 4
Alteromonas_macleodii_str._'English_Channel_615' 4 4
Alteromonas_macleodii_AltDE1 4 4
Alteromonas_macleodii_str._'English_Channel_673' 7 6
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 7 6
Alteromonas_macleodii_str._'Black_Sea_11' 6 6
Alteromonas_macleodii_ATCC_27126 7 6
Alcanivorax_dieselolei_B5 3 3
Thalassolituus_oleivorans_MIL-1 2 2
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 2 2
Stenotrophomonas_maltophilia_R551-3 2 2
Thioalkalivibrio_nitratireducens_DSM_14787 3 3
Thioflavicoccus_mobilis_8321 4 4
Coxiella_burnetii_CbuK_Q154 1 1
Coxiella_burnetii_CbuG_Q212 1 1
Coxiella_burnetii_RSA_493 1 1
Legionella_pneumophila_str._Paris 2 2
Legionella_pneumophila_str._Lens 2 2
Legionella_pneumophila_subsp._pneumophila_LPE509 2 2
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 2 2
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 2 2
Legionella_pneumophila_subsp._pneumophila 2 2
Legionella_pneumophila_subsp._pneumophila 2 2
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 2 2
Legionella_pneumophila_2300/99_Alcoy 2 2
Rahnella_aquatilis_HX2 1 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1 1
Serratia_marcescens_WW4 1 1
Azotobacter_vinelandii_CA6 3 3
Azotobacter_vinelandii_CA 3 3
Pseudomonas_denitrificans_ATCC_13867 7 7
Pseudomonas_syringae_pv._phaseolicola_1448A 4 4
Pseudomonas_syringae_pv._syringae_B728a 4 4
Pseudomonas_stutzeri_CCUG_29243 6 6
Pseudomonas_stutzeri_DSM_10701 6 6
Pseudomonas_stutzeri_DSM_4166 6 6
Pseudomonas_stutzeri_RCH2 6 6
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 6 6
Pseudomonas_monteilii_SB3101 4 4
Pseudomonas_monteilii_SB3078 4 4
Pseudomonas_putida_H8234 5 5
Pseudomonas_putida_HB3267 4 4
Pseudomonas_putida_NBRC_14164 4 4
Pseudomonas_putida_DOT-T1E 4 4
Pseudomonas_putida_S16 4 4
Pseudomonas_putida_BIRD-1 4 4
Pseudomonas_putida_W619 4 4
Pseudomonas_putida_ND6 4 4
Pseudomonas_putida_KT2440 5 5
Pseudomonas_putida_GB-1 4 4
Pseudomonas_protegens_CHA0 4 4
Pseudomonas_poae_RE*1-1-14 3 3
Pseudomonas_fluorescens_F113 4 4
Pseudomonas_fluorescens_A506 3 3
Pseudomonas_fluorescens_R124 4 4
Pseudomonas_fluorescens_Pf0-1 4 4
Pseudomonas_resinovorans_NBRC_106553 5 5
Pseudomonas_mendocina_NK-01 6 6
Pseudomonas_aeruginosa_SCV20265 6 6
Pseudomonas_aeruginosa_MTB-1 6 6
Pseudomonas_aeruginosa_LES431 6 6
Pseudomonas_aeruginosa_RP73 6 6
Pseudomonas_aeruginosa_B136-33 6 6
Pseudomonas_aeruginosa_PA1R 7 7
Pseudomonas_aeruginosa_PA1 7 7
Pseudomonas_aeruginosa_DK2 6 6
Pseudomonas_aeruginosa_NCGM2.S1 6 6
Pseudomonas_aeruginosa_M18 6 6
Pseudomonas_aeruginosa_LESB58 6 6
Pseudomonas_aeruginosa_PA7 6 6
Pseudomonas_aeruginosa_PAO1 6 6
Methylophaga_sp._JAM7 5 5
Cycloclasticus_zancles_7-ME 3 3
Francisella_tularensis_subsp._mediasiatica_FSC147 1 1
Francisella_cf._novicida_Fx1 1 1
Candidatus_Nitrososphaera_gargensis_Ga9.2 3 3
Aeropyrum_camini_SY1_=_JCM_12091 1 1
Sulfolobus_islandicus_LAL14/1 2 2
Sulfolobus_islandicus_REY15A 1 1
Sulfolobus_islandicus_HVE10/4 2 2
Sulfolobus_islandicus_Y.G.57.14 2 2
Sulfolobus_islandicus_L.S.2.15 1 1
Sulfolobus_islandicus_M.16.27 2 2
Sulfolobus_islandicus_M.14.25 1 1
Sulfolobus_islandicus_M.16.4 1 1
Sulfolobus_islandicus_L.D.8.5 2 2
Sulfolobus_solfataricus_98/2 1 1
Ferroplasma_acidarmanus_fer1 1 1
Halovivax_ruber_XH-70 1 1
Natrinema_pellirubrum_DSM_15624 1 1
Natronococcus_occultus_SP4 1 1
Natronomonas_moolapensis_8.8.11 1 1
Haloarcula_hispanica_N601 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   20 20
Pan_troglodytes_69_2.1.4   (Chimpanzee)   15 15
Gorilla_gorilla_69_3.1   (Western gorilla)   16 16
Pongo_abelii_69_2   (Sumatran orangutan)   14 14
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   15 15
Macaca_mulatta_69_1   (Rhesus monkey)   22 22
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   13 13
Otolemur_garnettii_69_3   (Small-eared galago)   27 27
Microcebus_murinus_69_1   (Gray mouse lemur)   12 11
Rattus_norvegicus_69_3.4   (Norway rat)   13 13
Mus_musculus_69_38   (House mouse)   17 17
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   9 9
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   19 19
Cavia_porcellus_69_3   (Domestic guinea pig)   12 12
Oryctolagus_cuniculus_69_2   (Rabbit)   28 27
Ochotona_princeps_69   (American pika)   29 25
Tupaia_belangeri_69   (Northern tree shrew)   16 11
Sus_scrofa_69_10.2   (Pig)   28 28
Bos_taurus_69_3.1   (Cattle)   66 66
Vicugna_pacos_69_1   (Alpaca)   10 9
Tursiops_truncatus_69_1   (Bottlenose dolphin)   12 11
Mustela_putorius_furo_69_1.0   (Domestic ferret)   18 18
Ailuropoda_melanoleuca_69_1   (Giant panda)   16 16
Canis_familiaris_69_3.1   (Dog)   21 21
Felis_catus_69   (Domestic cat)   14 13
Equus_caballus_69_2   (Horse)   23 23
Myotis_lucifugus_69_2.0   (Little brown bat)   18 18
Pteropus_vampyrus_69_1   (Large flying fox)   13 12
Sorex_araneus_69_1   (European shrew)   10 8
Erinaceus_europaeus_69   (Western European hedgehog)   15 14
Procavia_capensis_69_1   (Cape rock hyrax)   13 11
Loxodonta_africana_69_3   (African savanna elephant)   17 17
Echinops_telfairi_69   (Small Madagascar hedgehog)   13 12
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   11 10
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   7 5
Macropus_eugenii_69_1.0   (Tammar wallaby)   13 13
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   38 38
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   92 92
Ornithorhynchus_anatinus_69_5   (Platypus)   11 10
Petromyzon_marinus_69_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_69_2   (Turkey)   12 12
Gallus_gallus_69_2   (Chicken)   19 19
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   15 15
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   29 28
Anolis_carolinensis_69_2.0   (Green anole)   14 14
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   28 28
Latimeria_chalumnae_69_1   (Coelacanth)   57 57
Gadus_morhua_69_1   (Atlantic cod)   11 11
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   8 8
Takifugu_rubripes_69_4   (Torafugu)   11 11
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   11 11
Oryzias_latipes_69_1   (Japanese medaka)   15 15
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   8 8
Oreochromis_niloticus_69_1.0   (Nile tilapia)   14 14
Danio_rerio_69_9   (Zebrafish)   11 11
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   5 5
Ciona_intestinalis_69   (Vase tunicate)   4 4
Drosophila_melanogaster_69_5   (Fruit fly)   14 14
Caenorhabditis_elegans_69_215   (Roundworm)   25 24
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   12 12
Arabidopsis_thaliana_10   (Thale cress)   72 71

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   52 52
Homo_sapiens__(NCBI_version)   (Human)   28 28
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   17 17
Loa_loa_v3.3_(Request)   (Eye worm)   7 7
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   10 10
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   5 5
Moniliophthora_perniciosa_FA553__(Genome_survey) 29 29
Picea_sitchensis__(Incomplete)   (Sitka spruce)   6 6
Lotus_japonicus__(Early_assembly) 107 107
Malus_x_domestica_(Duplicate)   (Apple)   98 95
Ricinus_communis__(Early_assembly)   (Castor bean)   77 75
Nicotiana_benthamiana_0.4.4_(Early_draft) 163 157
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   107 105
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   106 104
Phoenix_dactylifera__(Early_draft)   (Date palm)   40 39
Wolbachia_endosymbiont_of_Brugia_malayi_v1.0_(Broad_Institute) 1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 7 4
NCBI_plasmid_sequences_(Plasmids) 24 23
Protein_Data_Bank_(all_PDB_sequenc) 3202 3177
STRING_v9.0.5_(STRING) 5522 5409
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 10484 10459
NCBI_2017_08_genome 83051 78216
UniProt__viral_sequences_(Viral) 95120 95115
Protozoadb_2010_08_(Protozoadb) 230 227
Uniprot_2018_03_genome 338847 336430
PDB_chains_(SCOP_1.75)_(PDB) 136 133
NCBI_viral_sequences_(Viral) 82 82
TargetDB__(Targets) 119 119

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]