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Domain combinations for AFP III-like domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a AFP III-like domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   1 1
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_76_3.1   (Western gorilla)   1 1
Pongo_abelii_76_2   (Sumatran orangutan)   1 1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1 1
Papio_anubis_76   (Olive baboon)   1 1
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   2 2
Otolemur_garnettii_76_3   (Small-eared galago)   1 1
Microcebus_murinus_76_1   (Gray mouse lemur)   1 1
Rattus_norvegicus_76_5.0   (Norway rat)   1 1
Mus_musculus_76_38   (House mouse)   1 1
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1 1
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1 1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1 1
Cavia_porcellus_76_3   (Domestic guinea pig)   1 1
Oryctolagus_cuniculus_76_2   (Rabbit)   3 3
Ochotona_princeps_76   (American pika)   1 1
Tupaia_belangeri_76   (Northern tree shrew)   1 1
Sus_scrofa_76_10.2   (Pig)   1 1
Bos_taurus_76_3.1   (Cattle)   1 1
Ovis_aries_76_3.1   (Sheep)   1 1
Vicugna_pacos_76_1   (Alpaca)   1 1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1 1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1 1
Canis_familiaris_76_3.1   (Dog)   1 1
Felis_catus_76_6.2   (Domestic cat)   2 2
Equus_caballus_76_2   (Horse)   1 1
Myotis_lucifugus_76_2.0   (Little brown bat)   1 1
Pteropus_vampyrus_76_1   (Large flying fox)   1 1
Sorex_araneus_76_1   (European shrew)   1 1
Erinaceus_europaeus_76   (Western European hedgehog)   1 1
Procavia_capensis_76_1   (Cape rock hyrax)   1 1
Loxodonta_africana_76_3   (African savanna elephant)   1 1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_76_1.0   (Tammar wallaby)   2 2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1 1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1 1
Ornithorhynchus_anatinus_76_5   (Platypus)   1 1
Saccoglossus_kowalevskii_v3.0 2 2
Meleagris_gallopavo_76_2   (Turkey)   1 1
Gallus_gallus_76_4   (Chicken)   1 1
Anas_platyrhynchos_76_1.0   (Mallard)   1 1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1 1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1 1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   1 1
Anolis_carolinensis_76_2.0   (Green anole)   1 1
Xenopus_laevis_   (African clawed frog)   4 4
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   1 1
Latimeria_chalumnae_76_1   (Coelacanth)   1 1
Lepisosteus_oculatus_76   (Spotted gar)   1 1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   1 1
Takifugu_rubripes_76_4   (Torafugu)   1 1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1 1
Oryzias_latipes_76_1   (Japanese medaka)   1 1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1 1
Poecilia_formosa_76   (Amazon molly)   1 1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   3 3
Astyanax_mexicanus_76   (Mexican tetra)   2 2
Danio_rerio_76_9   (Zebrafish)   2 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1 1
Heliconius_melpomene_   (Postman butterfly)   1 1
Bombyx_mori_   (Domestic silkworm)   1 1
Lucilia_cuprina   (Australian sheep blowfly)   1 1
Drosophila_grimshawi_1.3 1 1
Drosophila_willistoni_1.3 1 1
Drosophila_pseudoobscura_2.13 1 1
Drosophila_persimilis_1.3 1 1
Drosophila_suzukii 2 2
Drosophila_yakuba_1.3 1 1
Drosophila_simulans_1.3 1 1
Drosophila_sechellia_1.3 1 1
Drosophila_melanogaster_76_5   (Fruit fly)   1 1
Drosophila_erecta_1.3 1 1
Drosophila_ananassae_1.3 1 1
Drosophila_virilis_1.2 1 1
Drosophila_mojavensis_1.3 1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1 1
Anopheles_darlingi_22   (American malaria mosquito)   1 1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1 1
Tribolium_castaneum_3.0   (Red flour beetle)   1 1
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   1 1
Rhodnius_prolixus_22 1 1
Daphnia_pulex_   (Common water flea)   1 1
Strigamia_maritima_22 1 1
Tetranychus_urticae_   (Two-spotted spider mite)   1 1
Micromonas_sp._RCC299_ 1 1
Leptolyngbya_sp._PCC_7376 1 1
Pseudanabaena_sp._PCC_7367 1 1
Synechococcus_sp._CC9311 2 2
Cyanothece_sp._PCC_8802 1 1
Calothrix_sp._PCC_7507 1 1
Nostoc_punctiforme_PCC_73102 1 1
Nostoc_sp._PCC_7524 1 1
Eggerthella_sp._YY7918 2 2
Eggerthella_lenta_DSM_2243 2 2
Ilumatobacter_coccineus 1 1
Geodermatophilus_obscurus_DSM_43160 1 1
Kineococcus_radiotolerans_SRS30216 1 1
Streptosporangium_roseum_DSM_43021 1 1
Saccharomonospora_viridis_DSM_43017 1 1
Kribbella_flavida_DSM_17836 1 1
Propionibacterium_propionicum_F0230a 1 1
Verrucosispora_maris_AB-18-032 1 1
Actinoplanes_sp._N902-109 1 1
Actinoplanes_missouriensis_431 1 1
Intrasporangium_calvum_DSM_43043 2 2
Rothia_mucilaginosa_DY-18 1 1
Rothia_dentocariosa_ATCC_17931 1 1
Anaerolinea_thermophila_UNI-1 1 1
Sphaerobacter_thermophilus_DSM_20745 1 1
Roseiflexus_castenholzii_DSM_13941 1 1
Chloroflexus_sp._MS-G 1 1
Oceanithermus_profundus_DSM_14977 1 1
Selenomonas_sputigena_ATCC_35185 1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Clostridium_clariflavum_DSM_19732 2 2
Clostridium_thermocellum_ATCC_27405 2 2
Candidatus_Desulforudis_audaxviator_MP104C 2 2
Thermincola_potens_JR 1 1
Desulfosporosinus_acidiphilus_SJ4 1 1
Desulfosporosinus_orientis_DSM_765 2 2
Desulfotomaculum_ruminis_DSM_2154 1 1
Acetobacterium_woodii_DSM_1030 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_sticklandii_DSM_519 1 1
Clostridium_saccharolyticum_WM1 1 1
Clostridium_lentocellum_DSM_5427 1 1
Eubacterium_rectale_ATCC_33656 1 1
Roseburia_hominis_A2-183 1 1
Butyrivibrio_proteoclasticus_B316 2 2
Butyrivibrio_fibrisolvens 1 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1 1
Heliobacterium_modesticaldum_Ice1 1 1
Alkaliphilus_oremlandii_OhILAs 1 1
Clostridium_novyi_NT 2 2
Clostridium_ljungdahlii_DSM_13528 1 1
Clostridium_kluyveri_DSM_555 2 2
Clostridium_beijerinckii_NCIMB_8052 1 1
Clostridium_tetani_E88 1 1
Clostridium_cellulovorans_743B 1 1
Clostridium_botulinum_A_str._ATCC_3502 2 2
Clostridium_acetobutylicum_ATCC_824 1 1
Mahella_australiensis_50-1_BON 1 1
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_kronotskyensis_2002 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Thermoanaerobacterium_xylanolyticum_LX-11 1 1
Thermoanaerobacter_tengcongensis_MB4 1 1
Moorella_thermoacetica_ATCC_39073 1 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1 1
Thermoanaerobacter_italicus_Ab9 1 1
Halothermothrix_orenii_H_168 2 2
Halanaerobium_praevalens_DSM_2228 1 1
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Enterococcus_faecium_Aus0004 1 1
Streptococcus_agalactiae_A909 1 1
Streptococcus_suis_P1/7 1 1
Exiguobacterium_sp._MH3 1 1
Brevibacillus_brevis_NBRC_100599 1 1
Paenibacillus_terrae_HPL-003 1 1
Solibacillus_silvestris_StLB046 1 1
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Lysinibacillus_sphaericus_C3-41 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 1 1
Halobacillus_halophilus_DSM_2266 1 1
Bacillus_sp._JS 1 1
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_atrophaeus_1942 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_pumilus_SAFR-032 1 1
Melioribacter_roseus_P3M 1 1
Pelodictyon_phaeoclathratiforme_BU-1 1 1
Salinibacter_ruber_M8 2 2
Flexibacter_litoralis_DSM_6794 1 1
Marivirga_tractuosa_DSM_4126 1 1
Fibrella_aestuarina 1 1
Dyadobacter_fermentans_DSM_18053 1 1
Cytophaga_hutchinsonii_ATCC_33406 1 1
Spirosoma_linguale_DSM_74 1 1
Tannerella_forsythia_ATCC_43037 1 1
Odoribacter_splanchnicus_DSM_20712 1 1
Bacteroides_helcogenes_P_36-108 1 1
Bacteroides_vulgatus_ATCC_8482 1 1
Bacteroides_thetaiotaomicron_VPI-5482 1 1
Solitalea_canadensis_DSM_3403 1 1
Pedobacter_heparinus_DSM_2366 1 1
Sphingobacterium_sp._21 1 1
Fluviicola_taffensis_DSM_16823 2 2
Zunongwangia_profunda_SM-A87 1 1
Gramella_forsetii_KT0803 2 2
Lacinutrix_sp._5H-3-7-4 1 1
Maribacter_sp._HTCC2170 1 1
Croceibacter_atlanticus_HTCC2559 1 1
Aequorivita_sublithincola_DSM_14238 1 1
Polaribacter_sp._MED152 1 1
Flavobacterium_indicum_GPTSA100-9 2 2
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_johnsoniae_UW101 1 1
Waddlia_chondrophila_WSU_86-1044 1 1
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Parachlamydia_acanthamoebae_UV-7 1 1
Phycisphaera_mikurensis_NBRC_102666 1 1
Thermovirga_lienii_DSM_17291 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1 1
Anaerobaculum_mobile_DSM_13181 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 2 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Brachyspira_murdochii_DSM_12563 1 1
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_pilosicoli_95/1000 1 1
Brachyspira_hyodysenteriae_WA1 1 1
Spirochaeta_smaragdinae_DSM_11293 1 1
Spirochaeta_caldaria_DSM_7334 2 2
Treponema_azotonutricium_ZAS-9 1 1
Treponema_primitia_ZAS-2 1 1
Treponema_brennaborense_DSM_12168 1 1
Treponema_succinifaciens_DSM_2489 1 1
Treponema_denticola_ATCC_35405 1 1
Spirochaeta_africana_DSM_8902 1 1
Spirochaeta_thermophila_DSM_6192 1 1
Thermodesulfatator_indicus_DSM_15286 2 2
Desulfurispirillum_indicum_S5 1 1
Calditerrivibrio_nitroreducens_DSM_19672 1 1
Denitrovibrio_acetiphilus_DSM_12809 2 2
Deferribacter_desulfuricans_SSM1 1 1
Kosmotoga_olearia_TBF_19.5.1 1 1
Thermotoga_thermarum_DSM_5069 1 1
Thermotoga_sp._RQ2 1 1
Thermotoga_naphthophila_RKU-10 2 2
Thermotoga_petrophila_RKU-1 1 1
Thermotoga_neapolitana_DSM_4359 1 1
Thermotoga_maritima_MSB8 1 1
Thermovibrio_ammonificans_HB-1 1 1
Desulfurobacterium_thermolithotrophum_DSM_11699 1 1
Persephonella_marina_EX-H1 2 2
Hydrogenobacter_thermophilus_TK-6 1 1
Granulicella_mallensis_MP5ACTX8 1 1
Thermodesulfovibrio_yellowstonii_DSM_11347 1 1
Candidatus_Nitrospira_defluvii 1 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1
Candidatus_Methylomirabilis_oxyfera 1 1
Acidithiobacillus_caldus_SM-1 1 1
Bacteriovorax_marinus_SJ 1 1
Bdellovibrio_bacteriovorus_HD100 1 1
Nautilia_profundicola_AmH 1 1
Sulfurospirillum_deleyianum_DSM_6946 1 1
Sulfurospirillum_barnesii_SES-3 2 2
Arcobacter_sp._L 1 1
Arcobacter_nitrofigilis_DSM_7299 1 1
Arcobacter_butzleri_RM4018 1 1
Campylobacter_lari_RM2100 2 2
Campylobacter_curvus_525.92 1 1
Campylobacter_concisus_13826 1 1
Campylobacter_jejuni_subsp._doylei_269.97 2 2
Campylobacter_sp._03-427 1 1
Campylobacter_fetus_subsp._fetus_82-40 1 1
uncultured_Sulfuricurvum_sp._RIFRC-1 2 2
Sulfuricurvum_kujiense_DSM_16994 2 2
Sulfurimonas_autotrophica_DSM_16294 1 1
Sulfurimonas_denitrificans_DSM_1251 1 1
Wolinella_succinogenes_DSM_1740 1 1
Helicobacter_cetorum_MIT_00-7128 2 2
Helicobacter_bizzozeronii_CIII-1 2 2
Helicobacter_hepaticus_ATCC_51449 1 1
Helicobacter_mustelae_12198 2 2
Helicobacter_felis_ATCC_49179 2 2
Helicobacter_cinaedi_PAGU611 2 2
Helicobacter_acinonychis_str._Sheeba 2 2
Helicobacter_pylori_B38 1 1
Nitratiruptor_sp._SB155-2 1 1
Desulfarculus_baarsii_DSM_2075 1 1
Desulfobacca_acetoxidans_DSM_11109 2 2
Syntrophus_aciditrophicus_SB 1 1
Desulfomonile_tiedjei_DSM_6799 1 1
Desulfobulbus_propionicus_DSM_2032 1 1
Desulfatibacillum_alkenivorans_AK-01 2 2
Desulfobacterium_autotrophicum_HRM2 1 1
Desulfohalobium_retbaense_DSM_5692 1 1
Desulfomicrobium_baculatum_DSM_4028 1 1
Desulfovibrio_piezophilus 2 2
Desulfovibrio_aespoeensis_Aspo-2 2 2
Desulfovibrio_magneticus_RS-1 2 2
Desulfovibrio_alaskensis_G20 2 2
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 3 3
Desulfovibrio_salexigens_DSM_2638 1 1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1 1
Desulfovibrio_africanus_str._Walvis_Bay 1 1
Hippea_maritima_DSM_10411 1 1
Geobacter_daltonii_FRC-32 1 1
Geobacter_uraniireducens_Rf4 1 1
Geobacter_lovleyi_SZ 2 2
Geobacter_bemidjiensis_Bem 1 1
Geobacter_sulfurreducens_KN400 2 2
Geobacter_metallireducens_GS-15 1 1
Myxococcus_xanthus_DK_1622 1 1
Myxococcus_fulvus_HW-1 1 1
Dechloromonas_aromatica_RCB 1 1
Dechlorosoma_suillum_PS 1 1
Pseudogulbenkiania_sp._NH8B 1 1
Chromobacterium_violaceum_ATCC_12472 2 2
Neisseria_meningitidis_FAM18 1 1
beta_proteobacterium_CB 1 1
Thiomonas_arsenitoxydans 2 2
Thiomonas_intermedia_K12 2 2
Burkholderia_phymatum_STM815 1 1
Ralstonia_pickettii_12D 1 1
Burkholderia_sp._RPE64 1 1
Verminephrobacter_eiseniae_EF01-2 1 1
Herminiimonas_arsenicoxydans 1 1
Bordetella_petrii_DSM_12804 1 1
Bordetella_avium_197N 2 2
Achromobacter_xylosoxidans 2 2
Nitrosomonas_eutropha_C91 1 1
Nitrosomonas_europaea_ATCC_19718 1 1
Methylovorus_glucosetrophus_SIP3-4 1 1
Methylobacillus_flagellatus_KT 1 1
Magnetococcus_marinus_MC-1 2 2
Asticcacaulis_excentricus_CB_48 1 1
Brevundimonas_subvibrioides_ATCC_15264 1 1
Caulobacter_sp._K31 1 1
Caulobacter_crescentus_NA1000 1 1
Caulobacter_segnis_ATCC_21756 1 1
Phenylobacterium_zucineum_HLK1 1 1
Sphingopyxis_alaskensis_RB2256 2 2
Maricaulis_maris_MCS10 1 1
Hirschia_baltica_ATCC_49814 1 1
Pseudovibrio_sp._FO-BEG1 1 1
Roseobacter_litoralis_Och_149 1 1
Roseobacter_denitrificans_OCh_114 2 2
Rhodobacter_capsulatus_SB_1003 1 1
Paracoccus_denitrificans_PD1222 2 2
Magnetospirillum_magneticum_AMB-1 3 3
Rhodospirillum_centenum_SW 1 1
Azospirillum_lipoferum_4B 2 2
Azospirillum_sp._B510 1 1
Azospirillum_brasilense_Sp245 1 1
alpha_proteobacterium_HIMB5 1 1
Candidatus_Pelagibacter_sp._IMCC9063 2 2
Methylobacterium_chloromethanicum_CM4 1 1
Sinorhizobium_fredii_NGR234 1 1
Rhizobium_etli_CIAT_652 1 1
Rhodopseudomonas_palustris_BisA53 1 1
Nitrobacter_winogradskyi_Nb-255 2 2
Nitrobacter_hamburgensis_X14 1 1
Bradyrhizobium_japonicum_USDA_110 2 2
Teredinibacter_turnerae_T7901 1 1
Haemophilus_parainfluenzae_T3T1 1 1
Oceanimonas_sp._GK1 1 1
Aeromonas_veronii_B565 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Aliivibrio_salmonicida_LFI1238 3 3
Vibrio_fischeri_MJ11 1 1
Vibrio_sp._Ex25 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_splendidus_LGP32 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Photobacterium_profundum_SS9 2 2
Psychromonas_sp._CNPT3 1 1
Idiomarina_loihiensis_L2TR 2 2
Shewanella_loihica_PV-4 1 1
Shewanella_sediminis_HAW-EB3 1 1
Shewanella_denitrificans_OS217 2 2
Shewanella_pealeana_ATCC_700345 1 1
Shewanella_oneidensis_MR-1 1 1
Shewanella_baltica_OS185 1 1
Shewanella_woodyi_ATCC_51908 3 3
Shewanella_amazonensis_SB2B 1 1
Shewanella_violacea_DSS12 1 1
Shewanella_putrefaciens_CN-32 1 1
Colwellia_psychrerythraea_34H 1 1
Pseudoalteromonas_sp._SM9913 1 1
Pseudoalteromonas_atlantica_T6c 1 1
Glaciecola_sp._4H-3-7+YE-5 3 3
Glaciecola_nitratireducens_FR1064 1 1
Marinobacter_adhaerens_HP15 1 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1 1
Alteromonas_sp._SN2 1 1
Alteromonas_macleodii_str._'Deep_ecotype' 1 1
Hahella_chejuensis_KCTC_2396 2 2
Marinomonas_posidonica_IVIA-Po-181 1 1
Marinomonas_sp._MWYL1 1 1
Marinomonas_mediterranea_MMB-1 3 3
Methylomicrobium_alcaliphilum 2 2
Methylomonas_methanica_MC09 2 2
Halothiobacillus_neapolitanus_c2 1 1
Alkalilimnicola_ehrlichii_MLHE-1 2 2
Nitrosococcus_halophilus_Nc4 1 1
Legionella_pneumophila_str._Corby 2 2
Edwardsiella_ictaluri_93-146 1 1
Edwardsiella_tarda_EIB202 1 1
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 1 1
Erwinia_amylovora_ATCC_49946 1 1
Enterobacteriaceae_bacterium_strain_FGI_57 1 1
Pseudomonas_sp._UW4 1 1
Pseudomonas_stutzeri_A1501 1 1
Pseudomonas_protegens_Pf-5 1 1
Pseudomonas_sp._VLB120 1 1
Psychrobacter_arcticus_273-4 2 2
Thiomicrospira_crunogena_XCL-2 1 1
Francisella_noatunensis_subsp._orientalis_str._Toba_04 1 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1
Nitrosopumilus_maritimus_SCM1 1 1
halophilic_archaeon_DL31 1 1
Methanococcoides_burtonii_DSM_6242 1 1
Methanospirillum_hungatei_JF-1 1 1
Halopiger_xanaduensis_SH-6 1 1
Natrialba_magadii_ATCC_43099 1 1
Halomicrobium_mukohataei_DSM_12286 1 1
Methanocaldococcus_jannaschii_DSM_2661 1 1
Methanococcus_aeolicus_Nankai-3 1 1
Methanococcus_maripaludis_C5 1 1
Methanobrevibacter_sp._AbM4 1 1
Methanobrevibacter_ruminantium_M1 1 1
Methanobrevibacter_smithii_ATCC_35061 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1 1
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1 1
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1 1
Dactylococcopsis_salina_PCC_8305 2 2
Synechococcus_sp._CC9902 2 2
Synechococcus_sp._CC9605 1 1
Synechococcus_sp._WH_8102 2 2
Prochlorococcus_marinus_str._NATL1A 1 1
Prochlorococcus_marinus_str._MIT_9301 1 1
Prochlorococcus_marinus_str._AS9601 1 1
Prochlorococcus_marinus_str._MIT_9215 1 1
Prochlorococcus_marinus_str._MIT_9211 1 1
Prochlorococcus_marinus_str._MIT_9313 1 1
Prochlorococcus_marinus_str._MIT_9303 1 1
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._ATCC_51142 1 1
Cyanothece_sp._PCC_8801 1 1
Stanieria_cyanosphaera_PCC_7437 1 1
Amycolatopsis_orientalis_HCCB10007 1 1
Propionibacterium_avidum_44067 1 1
Actinoplanes_friuliensis_DSM_7358 1 1
Actinomyces_graevenitzii_C83_ 1 1
Clostridium_thermocellum_DSM_1313 2 2
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_autoethanogenum_DSM_10061 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1 1
Clostridium_kluyveri_NBRC_12016 2 2
Clostridium_tetani_genome_12124569 1 1
Clostridium_botulinum_H04402_065 2 2
Clostridium_botulinum_BKT015925 2 2
Clostridium_botulinum_F_str._230613 2 2
Clostridium_botulinum_F_str._Langeland 2 2
Clostridium_botulinum_E3_str._Alaska_E43 2 2
Clostridium_botulinum_B1_str._Okra 2 2
Clostridium_botulinum_Ba4_str._657 2 2
Clostridium_botulinum_A2_str._Kyoto 2 2
Clostridium_botulinum_A3_str._Loch_Maree 3 3
Clostridium_botulinum_A_str._Hall 2 2
Clostridium_botulinum_A_str._ATCC_19397 2 2
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1 1
Halobacteroides_halobius_DSM_5150 1 1
Enterococcus_faecium_Aus0085 1 1
Enterococcus_faecium_DO 1 1
Streptococcus_agalactiae_ILRI112 1 1
Streptococcus_agalactiae_ILRI005 1 1
Streptococcus_agalactiae_09mas018883 1 1
Streptococcus_agalactiae_2-22 1 1
Streptococcus_agalactiae_SA20-06 1 1
Streptococcus_agalactiae_GD201008-001 1 1
Streptococcus_agalactiae_NEM316 1 1
Streptococcus_agalactiae_2603V/R 1 1
Streptococcus_suis_T15 1 1
Streptococcus_suis_TL13 1 1
Streptococcus_suis_SC070731 1 1
Streptococcus_suis_S735 1 1
Streptococcus_suis_SS12 1 1
Streptococcus_suis_ST1 1 1
Streptococcus_suis_A7 1 1
Streptococcus_suis_JS14 1 1
Streptococcus_suis_BM407 1 1
Streptococcus_suis_SC84 1 1
Streptococcus_suis_GZ1 1 1
Streptococcus_suis_98HAH33 1 1
Streptococcus_suis_05ZYH33 1 1
Thermobacillus_composti_KWC4 1 1
Paenibacillus_polymyxa_CR1 1 1
Paenibacillus_polymyxa_E681 1 1
Geobacillus_sp._Y4.1MC1 1 1
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 1 1
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 1 1
Bacillus_thuringiensis_MC28 1 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1 1
Bacillus_cereus_G9842 1 1
Salinibacter_ruber_DSM_13855 1 1
Emticicia_oligotrophica_DSM_17448 1 1
Bacteroides_fragilis_638R 1 1
Nonlabens_dokdonensis_DSW-6 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Lai_str._56601 2 2
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 2 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Brachyspira_pilosicoli_WesB 1 1
Brachyspira_pilosicoli_B2904 1 1
Brachyspira_pilosicoli_P43/6/78 1 1
Treponema_pedis_str._T_A4 2 2
Spirochaeta_thermophila_DSM_6578 1 1
Thermotoga_maritima_MSB8 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Arcobacter_butzleri_7h1h 2 2
Arcobacter_butzleri_ED-1 2 2
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 2 2
Campylobacter_jejuni_RM1221 2 2
Campylobacter_jejuni_subsp._jejuni_00-2544 2 2
Campylobacter_jejuni_subsp._jejuni_00-2538 2 2
Campylobacter_jejuni_subsp._jejuni_00-2426 2 2
Campylobacter_jejuni_subsp._jejuni_00-2425 3 3
Campylobacter_jejuni_subsp._jejuni_PT14 3 3
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 2 2
Campylobacter_jejuni_subsp._jejuni_S3 2 2
Campylobacter_jejuni_subsp._jejuni_M1 1 1
Campylobacter_jejuni_subsp._jejuni_IA3902 3 3
Campylobacter_jejuni_subsp._jejuni_81116 2 2
Campylobacter_jejuni_subsp._jejuni_81-176 2 2
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 3 3
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 3 3
Campylobacter_coli_76339 3 3
Campylobacter_coli_15-537360 2 2
Campylobacter_coli_CVM_N29710 2 2
Helicobacter_cetorum_MIT_99-5656 2 2
Helicobacter_pylori_BM012S 1 1
Helicobacter_pylori_BM012A 1 1
Helicobacter_pylori_SouthAfrica20 1 1
Helicobacter_pylori_UM298 1 1
Helicobacter_pylori_UM066 1 1
Helicobacter_pylori_UM037 1 1
Helicobacter_pylori_UM299 1 1
Helicobacter_pylori_UM032 1 1
Helicobacter_pylori_OK310 1 1
Helicobacter_pylori_OK113 1 1
Helicobacter_pylori_Rif2 1 1
Helicobacter_pylori_Rif1 1 1
Helicobacter_pylori_HUP-B14 1 1
Helicobacter_pylori_PeCan18 1 1
Helicobacter_pylori_Shi169 2 2
Helicobacter_pylori_Shi112 1 1
Helicobacter_pylori_Shi417 2 2
Helicobacter_pylori_XZ274 1 1
Helicobacter_pylori_Aklavik86 2 2
Helicobacter_pylori_Aklavik117 1 1
Helicobacter_pylori_SNT49 1 1
Helicobacter_pylori_Puno135 2 2
Helicobacter_pylori_Puno120 2 2
Helicobacter_pylori_ELS37 1 1
Helicobacter_pylori_Gambia94/24 1 1
Helicobacter_pylori_SouthAfrica7 1 1
Helicobacter_pylori_India7 1 1
Helicobacter_pylori_Lithuania75 1 1
Helicobacter_pylori_2017 1 1
Helicobacter_pylori_2018 1 1
Helicobacter_pylori_908 1 1
Helicobacter_pylori_F57 1 1
Helicobacter_pylori_F30 1 1
Helicobacter_pylori_F16 1 1
Helicobacter_pylori_Sat464 2 2
Helicobacter_pylori_Cuz20 1 1
Helicobacter_pylori_PeCan4 1 1
Helicobacter_pylori_SJM180 1 1
Helicobacter_pylori_B8 1 1
Helicobacter_pylori_52 1 1
Helicobacter_pylori_v225d 1 1
Helicobacter_pylori_83 1 1
Helicobacter_pylori_35A 1 1
Helicobacter_pylori_P12 1 1
Helicobacter_pylori_G27 1 1
Helicobacter_pylori_Shi470 1 1
Helicobacter_pylori_HPAG1 1 1
Helicobacter_pylori_51 1 1
Helicobacter_pylori_F32 1 1
Helicobacter_pylori_J99 1 1
Helicobacter_pylori_26695 1 1
Helicobacter_pylori_26695 1 1
Desulfocapsa_sulfexigens_DSM_10523 3 3
Desulfobacula_toluolica_Tol2 1 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 6 6
Desulfovibrio_vulgaris_RCH1 2 2
Desulfovibrio_vulgaris_str._'Miyazaki_F' 3 3
Desulfovibrio_vulgaris_str._Hildenborough 2 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1 1
Desulfovibrio_desulfuricans_ND132 2 2
Geobacter_sp._M18 2 2
Geobacter_sulfurreducens_PCA 2 2
Myxococcus_stipitatus_DSM_14675 1 1
Neisseria_meningitidis_G2136 1 1
Neisseria_meningitidis_M04-240196 1 1
Neisseria_meningitidis_M01-240149 1 1
Neisseria_meningitidis_NZ-05/33 1 1
Neisseria_meningitidis_M01-240355 1 1
Neisseria_meningitidis_8013 1 1
Neisseria_meningitidis_053442 1 1
Neisseria_meningitidis_H44/76 1 1
Neisseria_meningitidis_alpha710 1 1
Neisseria_meningitidis_MC58 1 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1 1
Sulfuricella_denitrificans_skB26 1 1
Caulobacter_crescentus_CB15 1 1
Octadecabacter_antarcticus_307 1 1
Octadecabacter_arcticus_238 1 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 2 2
Sinorhizobium_fredii_HH103 1 1
Sinorhizobium_meliloti_Rm41 1 1
Rhizobium_etli_bv._mimosae_str._Mim1 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1 1
Rhodopseudomonas_palustris_HaA2 1 1
Bradyrhizobium_japonicum_USDA_6 2 2
Mannheimia_haemolytica_USMARC_2286 1 1
Mannheimia_haemolytica_M42548 1 1
Mannheimia_haemolytica_D174 1 1
Mannheimia_haemolytica_D171 1 1
Mannheimia_haemolytica_D153 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-183 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-185 1 1
Actinobacillus_suis_H91-0380 2 2
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_fischeri_ES114 1 1
Vibrio_vulnificus_CMCP6 1 1
Vibrio_vulnificus_YJ016 1 1
Idiomarina_loihiensis_GSL_199 2 2
Shewanella_sp._W3-18-1 1 1
Shewanella_sp._ANA-3 1 1
Shewanella_baltica_OS678 1 1
Shewanella_baltica_OS195 1 1
Shewanella_sp._MR-7 1 1
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1 1
Alteromonas_macleodii_AltDE1 1 1
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_str._'Black_Sea_11' 2 2
Alteromonas_macleodii_ATCC_27126 1 1
Alcanivorax_dieselolei_B5 1 1
Legionella_pneumophila_str._Paris 2 2
Legionella_pneumophila_str._Lens 2 2
Legionella_pneumophila_subsp._pneumophila_LPE509 2 2
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 2 2
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 2 2
Legionella_pneumophila_subsp._pneumophila 2 2
Legionella_pneumophila_subsp._pneumophila 2 2
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 2 2
Legionella_pneumophila_2300/99_Alcoy 2 2
Morganella_morganii_subsp._morganii_KT 1 1
Edwardsiella_tarda_C07-087 1 1
Edwardsiella_tarda_FL6-60 1 1
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_FGI94 1 1
Serratia_marcescens_WW4 1 1
Erwinia_amylovora_CFBP1430 1 1
Salmonella_bongori_N268-08 1 1
Escherichia_coli_E._coli_PMV-1 1 1
Escherichia_coli_O7:K1_str._CE10 1 1
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_IHE3034 1 1
Escherichia_coli_IAI39 1 1
Escherichia_coli_55989 1 1
Escherichia_coli_S88 1 1
Escherichia_coli_SMS-3-5 1 1
Escherichia_coli_APEC_O1 1 1
Escherichia_coli_UTI89 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1 1
Pseudomonas_syringae_pv._syringae_B728a 1 1
Pseudomonas_stutzeri_RCH2 1 1
Pseudomonas_putida_BIRD-1 1 1
Pseudomonas_putida_W619 1 1
Pseudomonas_protegens_CHA0 1 1
Pseudomonas_fluorescens_F113 1 1
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_fluorescens_Pf0-1 1 1
Pseudomonas_mendocina_NK-01 1 1
Acinetobacter_genomosp._13TU__RUH2624 1 1
Acinetobacter_baumannii_BJAB0868 1 1
Acinetobacter_baumannii_BJAB0715 1 1
Acinetobacter_baumannii_TCDC-AB0715 1 1
Acinetobacter_baumannii_1656-2 1 1
Acinetobacter_baumannii_SDF 1 1
Acinetobacter_baumannii_MDR-ZJ06 1 1
Acinetobacter_baumannii_ACICU 1 1
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 1 1
Methanolobus_psychrophilus_R15 1 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 1 1
Haloquadratum_walsbyi_C23 1 1
Halorhabdus_tiamatea_SARL4B 1 1
Methanobacterium_sp._SWAN-1 2 2

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   1 1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_69_3.1   (Western gorilla)   1 1
Pongo_abelii_69_2   (Sumatran orangutan)   1 1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1 1
Otolemur_garnettii_69_3   (Small-eared galago)   1 1
Microcebus_murinus_69_1   (Gray mouse lemur)   1 1
Rattus_norvegicus_69_3.4   (Norway rat)   1 1
Mus_musculus_69_38   (House mouse)   1 1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1 1
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1 1
Cavia_porcellus_69_3   (Domestic guinea pig)   1 1
Oryctolagus_cuniculus_69_2   (Rabbit)   3 3
Ochotona_princeps_69   (American pika)   1 1
Tupaia_belangeri_69   (Northern tree shrew)   1 1
Sus_scrofa_69_10.2   (Pig)   1 1
Bos_taurus_69_3.1   (Cattle)   1 1
Vicugna_pacos_69_1   (Alpaca)   1 1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1 1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1 1
Canis_familiaris_69_3.1   (Dog)   1 1
Felis_catus_69   (Domestic cat)   1 1
Equus_caballus_69_2   (Horse)   1 1
Myotis_lucifugus_69_2.0   (Little brown bat)   1 1
Pteropus_vampyrus_69_1   (Large flying fox)   1 1
Sorex_araneus_69_1   (European shrew)   1 1
Erinaceus_europaeus_69   (Western European hedgehog)   1 1
Procavia_capensis_69_1   (Cape rock hyrax)   1 1
Loxodonta_africana_69_3   (African savanna elephant)   1 1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_69_1.0   (Tammar wallaby)   2 2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1 1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1 1
Ornithorhynchus_anatinus_69_5   (Platypus)   1 1
Meleagris_gallopavo_69_2   (Turkey)   1 1
Gallus_gallus_69_2   (Chicken)   1 1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1 1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   1 1
Anolis_carolinensis_69_2.0   (Green anole)   1 1
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1 1
Latimeria_chalumnae_69_1   (Coelacanth)   1 1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   1 1
Takifugu_rubripes_69_4   (Torafugu)   1 1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1 1
Oryzias_latipes_69_1   (Japanese medaka)   1 1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1 1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2 2
Danio_rerio_69_9   (Zebrafish)   2 2
Drosophila_melanogaster_69_5   (Fruit fly)   1 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1 1
Homo_sapiens__(NCBI_version)   (Human)   1 1
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   1 1
Heliconius_numata__(Incomplete) 2 2
Ricinus_communis__(Early_assembly)   (Castor bean)   1 1
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 13 13
PDB_chains_(SCOP_1.75)_(PDB) 36 35
Protein_Data_Bank_(all_PDB_sequenc) 77 75
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 169 169
STRING_v9.0.5_(STRING) 351 351
NCBI_viral_sequences_(Viral) 1 1
Uniprot_2018_03_genome 8497 8485
NCBI_2017_08_genome 21298 21298
TargetDB__(Targets) 21 21

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