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Domain combinations for Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   88 55
Pan_troglodytes_76_2.1.4   (Chimpanzee)   23 14
Gorilla_gorilla_76_3.1   (Western gorilla)   31 18
Pongo_abelii_76_2   (Sumatran orangutan)   24 14
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   29 16
Papio_anubis_76   (Olive baboon)   27 15
Macaca_mulatta_76_1   (Rhesus monkey)   32 21
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   55 32
Otolemur_garnettii_76_3   (Small-eared galago)   26 15
Microcebus_murinus_76_1   (Gray mouse lemur)   19 13
Rattus_norvegicus_76_5.0   (Norway rat)   31 17
Mus_musculus_76_38   (House mouse)   53 29
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   16 11
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   20 12
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   25 14
Cavia_porcellus_76_3   (Domestic guinea pig)   30 16
Oryctolagus_cuniculus_76_2   (Rabbit)   24 14
Ochotona_princeps_76   (American pika)   16 12
Tupaia_belangeri_76   (Northern tree shrew)   13 9
Sus_scrofa_76_10.2   (Pig)   23 14
Bos_taurus_76_3.1   (Cattle)   25 15
Ovis_aries_76_3.1   (Sheep)   24 16
Vicugna_pacos_76_1   (Alpaca)   6 5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   23 14
Mustela_putorius_furo_76_1.0   (Domestic ferret)   27 15
Ailuropoda_melanoleuca_76_1   (Giant panda)   30 18
Canis_familiaris_76_3.1   (Dog)   28 18
Felis_catus_76_6.2   (Domestic cat)   23 14
Equus_caballus_76_2   (Horse)   26 16
Myotis_lucifugus_76_2.0   (Little brown bat)   27 17
Pteropus_vampyrus_76_1   (Large flying fox)   20 13
Sorex_araneus_76_1   (European shrew)   10 8
Erinaceus_europaeus_76   (Western European hedgehog)   13 8
Procavia_capensis_76_1   (Cape rock hyrax)   20 11
Loxodonta_africana_76_3   (African savanna elephant)   33 21
Echinops_telfairi_76   (Small Madagascar hedgehog)   14 10
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   34 20
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   8 6
Macropus_eugenii_76_1.0   (Tammar wallaby)   23 14
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   37 21
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   30 16
Ornithorhynchus_anatinus_76_5   (Platypus)   20 14
Saccoglossus_kowalevskii_v3.0 49 31
Petromyzon_marinus_76_7.0   (Sea lamprey)   15 10
Meleagris_gallopavo_76_2   (Turkey)   21 12
Gallus_gallus_76_4   (Chicken)   22 12
Anas_platyrhynchos_76_1.0   (Mallard)   19 12
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   17 12
Ficedula_albicollis_76_1.0   (Collared flycatcher)   19 11
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   18 10
Anolis_carolinensis_76_2.0   (Green anole)   21 13
Xenopus_laevis_   (African clawed frog)   10 7
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   30 17
Latimeria_chalumnae_76_1   (Coelacanth)   33 18
Lepisosteus_oculatus_76   (Spotted gar)   31 17
Gadus_morhua_76_1   (Atlantic cod)   21 14
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   34 21
Takifugu_rubripes_76_4   (Torafugu)   61 34
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   24 14
Oryzias_latipes_76_1   (Japanese medaka)   23 14
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   25 15
Poecilia_formosa_76   (Amazon molly)   25 15
Oreochromis_niloticus_76_1.0   (Nile tilapia)   30 17
Astyanax_mexicanus_76   (Mexican tetra)   27 15
Danio_rerio_76_9   (Zebrafish)   36 21
Oikopleura_dioica 14 9
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   15 10
Ciona_intestinalis_76   (Vase tunicate)   16 9
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   17 13
Adineta_vaga 83 47
Octopus_bimaculoides_280 18 14
Crassostrea_gigas_22   (Pacific oyster)   16 11
Lottia_gigantea_   (Owl limpet)   19 12
Helobdella_robusta_ 37 24
Capitella_sp._I_ 16 11
Danaus_plexippus_OGS1.0   (Monarch butterfly)   13 10
Heliconius_melpomene_   (Postman butterfly)   11 7
Bombyx_mori_   (Domestic silkworm)   12 10
Nasonia_vitripennis_   (Jewel wasp)   6 4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   28 16
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   7 6
Linepithema_humile_v1.1   (Argentine ant)   9 7
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   10 7
Solenopsis_invicta_v.2.2.3   (Red fire ant)   4 4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   9 6
Atta_cephalotes_v1.1 9 8
Camponotus_floridanus_v3.3   (Florida carpenter ant)   10 7
Lucilia_cuprina   (Australian sheep blowfly)   8 5
Drosophila_grimshawi_1.3 9 7
Drosophila_willistoni_1.3 11 8
Drosophila_pseudoobscura_2.13 11 9
Drosophila_persimilis_1.3 8 7
Drosophila_suzukii 10 7
Drosophila_yakuba_1.3 11 9
Drosophila_simulans_1.3 12 7
Drosophila_sechellia_1.3 15 9
Drosophila_melanogaster_76_5   (Fruit fly)   18 11
Drosophila_erecta_1.3 11 8
Drosophila_ananassae_1.3 10 8
Drosophila_virilis_1.2 11 8
Drosophila_mojavensis_1.3 10 8
Megaselia_scalaris_22 4 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   8 5
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   5 4
Anopheles_darlingi_22   (American malaria mosquito)   5 4
Anopheles_gambiae_49_3j   (African malaria mosquito)   4 3
Tribolium_castaneum_3.0   (Red flour beetle)   14 10
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   10 6
Acyrthosiphon_pisum_   (Pea aphid)   4 3
Rhodnius_prolixus_22 10 7
Daphnia_pulex_   (Common water flea)   7 4
Strigamia_maritima_22 11 7
Sarcoptes_scabiei 2 1
Tetranychus_urticae_   (Two-spotted spider mite)   7 3
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   4 3
Pristionchus_pacificus_ 7 5
Meloidogyne_incognita_   (Southern root-knot nematode)   7 3
Meloidogyne_hapla_ 3 1
Onchocerca_volvulus_22 4 2
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   4 2
Caenorhabditis_japonica_ 2 1
Caenorhabditis_brenneri_ 3 2
Caenorhabditis_remanei_ 2 1
Caenorhabditis_elegans_76_235   (Roundworm)   2 1
Caenorhabditis_briggsae_2 2 1
Trichinella_spiralis_22 4 3
Hymenolepis_microstoma_ 7 4
Echinococcus_multilocularis_ 9 6
Echinococcus_granulosus_ 7 5
Taenia_solium_   (Pork tapeworm)   9 6
Schistosoma_mansoni_ 18 10
Mnemiopsis_leidyi   (Sea walnut)   16 9
Acropora_digitifera_v1.0 27 18
Nematostella_vectensis_1.0   (Starlet sea anemone)   38 26
Hydra_vulgaris 21 15
Amphimedon_queenslandica 21 11
Trichoplax_adhaerens_ 23 13
Proterospongia_sp._ATCC_50818_ 27 21
Monosiga_brevicollis_ 22 15
Sphaeroforma_arctica_JP610_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 7 3
Sphaerobolus_stellatus_v1.0 1 1
Hydnomerulius_pinastri_v2.0 1 1
Pleurotus_ostreatus_   (Oyster mushroom)   1 1
Laccaria_bicolor_S238N-H82_ 1 1
Trichoderma_atroviride_ 2 1
Trichoderma_virens_Gv29-8_ 2 1
Trichoderma_harzianum_CBS_226.95_v1.0 2 1
Botrytis_cinerea_B05.10_ 1 1
Didymella_exigua_CBS_183.55_v1.0 1 1
Leptosphaeria_maculans_22 1 1
Setosphaeria_turcica_v1.0 1 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 1 1
Cochliobolus_carbonum_26-R-13_v1.0 1 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1 1
Alternaria_brassicicola_ 1 1
Cochliobolus_lunatus_m118_v2.0 1 1
Pyrenophora_teres_f._teres_22 1 1
Pyrenophora_tritici-repentis_ 1 1
Stagonospora_nodorum_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 1 1
Dothistroma_septosporum 1 1
Septoria_musiva_v1.0 1 1
Mycosphaerella_fijiensis_CIRAD86_ 1 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Paracoccidioides_brasiliensis_Pb18_ 1 1
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 1 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 1 1
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 1 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_glaucus 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 3 2
Aspergillus_terreus_NIH2624_ 4 2
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 1 1
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Catenaria_anguillulae_PL171_v1.0 9 5
Allomyces_macrogynus_ATCC_38327_ 15 7
Spizellomyces_punctatus_DAOM_BR117_ 8 5
Dictyostelium_discoideum 9 7
Dictyostelium_purpureum_ 10 7
Selaginella_moellendorffii_ 33 22
Pinus_taeda   (Loblolly pine)   10 9
Picea_abies   (Norway spruce)   7 5
Eucalyptus_grandis_v201   (Rose gum)   26 18
Theobroma_cacao_B97-61/B2_v1   (Cacao)   16 10
Gossypium_raimondii_v221 79 49
Citrus_clementina_v165 25 16
Citrus_sinensis_v154   (Sweet orange)   17 13
Thellungiella_halophila_v173 26 17
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   34 22
Capsella_rubella_v183 30 18
Arabidopsis_lyrata_   (Lyrate rockcress)   31 20
Arabidopsis_thaliana_10   (Thale cress)   29 19
Carica_papaya_   (Papaya)   6 4
Medicago_truncatula_   (Barrel medic)   94 50
Phaseolus_vulgaris_v186   (French bean)   41 26
Glycine_max_v109   (Soybean)   55 37
Cucumis_sativus_v122   (Cucumber)   32 22
Fragaria_vesca_   (Wild strawberry)   15 10
Malus_domestica_v196   (Apple)   33 23
Prunus_persica_v139   (Peach)   14 10
Linum_usitatissimum_v200   (Flax)   43 28
Manihot_esculenta_v147   (Cassava)   33 22
Populus_trichocarpa_v156   (Black cottonwood)   31 22
Vitis_vinifera_   (Wine grape)   13 10
Mimulus_guttatus_v140   (Spotted monkey flower)   19 13
Solanum_lycopersicum_v.2.3   (Tomato)   23 16
Solanum_tuberosum_   (Potato)   24 16
Actinidia_chinensis_Hongyang_ 27 17
Aquilegia_coerulea_v195 34 21
Triticum_urartu_22 10 8
Triticum_aestivum_22   (Bread wheat)   47 34
Aegilops_tauschii_22 18 11
Brachypodium_distachyon_   (Stiff brome)   21 12
Oryza_barthii_22   (African wild rice)   27 18
Oryza_meridionalis_22 24 16
Oryza_glumaepatula_22 22 13
Oryza_glaberrima   (African rice)   17 11
Oryza_punctata_22 16 11
Oryza_nivara_22 32 21
Oryza_brachyantha_22   (Malo sina)   12 8
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   19 12
Oryza_sativa_v193   (Rice)   19 12
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   16 11
Panicum_virgatum_v202   (Switchgrass)   36 23
Setaria_italica_v164   (Foxtail millet)   19 13
Zea_mays_subsp._mays_   (Maize)   27 19
Zea_mays_v181   (Maize)   28 19
Sorghum_bicolor_   (Sorghum)   14 10
Musa_balbisiana   (Balbis banana)   44 29
Musa_acuminata_22   (Wild Malaysian banana)   43 26
Amborella_trichopoda_22 11 7
Physcomitrella_patens 14 10
Coccomyxa_subellipsoidea_sp._C-169_v2 16 9
Asterochloris_sp._Cgr/DA1pho_v1.0 21 14
Chlorella_variabilis_sp._NC64A_ 8 7
Chlorella_vulgaris_ 15 9
Volvox_carteri_f._nagariensis_ 20 13
Volvox_carteri_v199 19 12
Chlamydomonas_reinhardtii_4.0 19 13
Ostreococcus_sp._RCC809_ 9 6
Ostreococcus_lucimarinus_CCE9901_ 9 6
Ostreococcus_tauri_ 8 5
Bathycoccus_prasinos_ 9 6
Micromonas_sp._RCC299_ 15 10
Micromonas_pusilla_CCMP1545_v3.0 18 12
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Thecamonas_trahens_ATCC_50062_ 27 17
Bigelowiella_natans_CCMP2755_22 24 15
Giardia_lamblia_2.3 22 9
Cyanophora_paradoxa_ 42 21
Leishmania_mexicana_2.4 44 21
Leishmania_major_strain_Friedlin_ 45 21
Leishmania_infantum_JPCM5_2.4 48 22
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 42 19
Trypanosoma_vivax_ 38 19
Trypanosoma_cruzi_strain_CL_Brener 45 21
Trypanosoma_congolense_2.4 43 19
Trypanosoma_brucei_gambiense_v4.1 40 18
Trypanosoma_brucei_TREU927_v4.1 41 18
Ectocarpus_siliculosus 62 28
Aureococcus_anophagefferens_ 50 25
Albugo_laibachii_22 13 7
Pythium_iwayamai_DAOM_BR242034_22 32 14
Pythium_arrhenomanes_ATCC_12531_22 17 11
Pythium_ultimum_v1.7-2 42 17
Pythium_aphanidermatum_DAOM_BR444_22 22 10
Pythium_irregulare_DAOM_BR486_22 33 16
Pythium_vexans_DAOM_BR484_22 32 13
Phytophthora_ramorum_1.1   (Sudden oak death agent)   27 15
Phytophthora_sojae_1.1 29 16
Phytophthora_infestans_T30-4_ 41 17
Phytophthora_capsici_ 16 10
Hyaloperonospora_arabidopsidis_22 2 1
Phaeodactylum_tricornutumCCAP_1055/1 15 7
Fragilariopsis_cylindrus 32 21
Thalassiosira_pseudonana_CCMP1335 27 23
Perkinsus_marinus_ATCC_50983_ 41 24
Paramecium_tetraurelia_ 967 511
Tetrahymena_thermophila_SB210_1_ 281 140
Ichthyophthirius_multifiliis_strain_G5_ 295 144
Cryptosporidium_hominis 8 4
Cryptosporidium_muris 10 5
Cryptosporidium_parvum_Iowa_II 10 5
Neospora_caninum 33 16
Toxoplasma_gondii_VEG 33 17
Toxoplasma_gondii_ME49 33 17
Toxoplasma_gondii_GT1 31 18
Babesia_bovis_T2Bo_ 24 10
Theileria_parva__ 7 4
Theileria_annulata 8 3
Plasmodium_falciparum_3D7_ 23 12
Plasmodium_vivax_SaI-1_7.0 22 13
Plasmodium_knowlesi_strain_H_ 23 14
Plasmodium_yoelii_ssp._yoelii_1_ 18 11
Plasmodium_chabaudi_ 23 14
Plasmodium_berghei_ANKA_ 24 14
Symbiodinium_minutum_clade_B1_v1.2 170 103
Naegleria_gruberi_ 32 20
Trichomonas_vaginalis_ 11 7
Guillardia_theta_CCMP2712_v1.0_ 193 114
Emiliania_huxleyi_CCMP1516_ 111 75
Synechocystis_sp._PCC_6803 3 1
Thermosynechococcus_sp._NK55 1 1
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_6312 2 1
Microcoleus_sp._PCC_7113 3 2
Trichodesmium_erythraeum_IMS101 2 1
Geitlerinema_sp._PCC_7407 2 1
Cyanothece_sp._PCC_8802 3 1
Calothrix_sp._PCC_7507 2 1
Mycoplasma_fermentans_M64 4 4
Atopobium_parvulum_DSM_20469 1 1
Frankia_sp._EAN1pec 1 1
Streptomyces_avermitilis_MA-4680 3 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Saccharopolyspora_erythraea_NRRL_2338 1 1
Salinispora_arenicola_CNS-205 2 2
Nocardia_farcinica_IFM_10152 1 1
Jonesia_denitrificans_DSM_20603 1 1
Renibacterium_salmoninarum_ATCC_33209 1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1 1
Clostridium_thermocellum_ATCC_27405 1 1
Ruminococcus_bromii 1 1
Oscillibacter_valericigenes_Sjm18-20 2 1
butyrate-producing_bacterium_SS3/4 3 1
Acetobacterium_woodii_DSM_1030 4 3
Clostridium_difficile_630 3 2
Clostridium_saccharolyticum_WM1 1 1
Clostridium_lentocellum_DSM_5427 2 1
Butyrivibrio_proteoclasticus_B316 4 2
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2 2
Clostridium_ljungdahlii_DSM_13528 1 1
Clostridium_beijerinckii_NCIMB_8052 4 3
Clostridium_tetani_E88 1 1
Clostridium_botulinum_A_str._ATCC_3502 2 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 2 2
Thermodesulfobium_narugense_DSM_14796 12 6
Carnobacterium_sp._17-4 1 1
Carnobacterium_sp._WN1359 1 1
Oenococcus_oeni_PSU-1 1 1
Lactobacillus_sakei_subsp._sakei_23K 1 1
Lactobacillus_plantarum_JDM1 1 1
Streptococcus_sp._I-P16 1 1
Streptococcus_sp._I-G2 1 1
Streptococcus_intermedius_JTH08 1 1
Streptococcus_gallolyticus_UCN34 1 1
Streptococcus_pseudopneumoniae_IS7493 1 1
Streptococcus_pasteurianus_ATCC_43144 1 1
Streptococcus_equi_subsp._equi_4047 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1 1
Streptococcus_infantarius_subsp._infantarius_CJ18 1 1
Streptococcus_macedonicus_ACA-DC_198 1 1
Streptococcus_mitis_B6 1 1
Streptococcus_uberis_0140J 1 1
Streptococcus_parauberis_KCTC_11537 1 1
Streptococcus_parasanguinis_ATCC_15912 1 1
Streptococcus_pyogenes_str._Manfredo 1 1
Streptococcus_pneumoniae_P1031 1 1
Streptococcus_agalactiae_A909 1 1
Streptococcus_mutans_NN2025 1 1
Streptococcus_thermophilus_LMD-9 1 1
Streptococcus_suis_P1/7 1 1
Streptococcus_sanguinis_SK36 1 1
Streptococcus_salivarius_57.I 1 1
Streptococcus_oralis_Uo5 1 1
Streptococcus_gordonii_str._Challis_substr._CH1 1 1
Brevibacillus_brevis_NBRC_100599 3 2
Paenibacillus_mucilaginosus_3016 2 1
Paenibacillus_polymyxa_M1 1 1
Lysinibacillus_sphaericus_C3-41 3 1
Oceanobacillus_iheyensis_HTE831 1 1
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_cereus_03BB102 1 1
Candidatus_Cloacamonas_acidaminovorans 1 1
Melioribacter_roseus_P3M 5 2
Ignavibacterium_album_JCM_16511 7 4
Haliscomenobacter_hydrossis_DSM_1100 10 6
Saprospira_grandis_str._Lewin 19 12
Niastella_koreensis_GR20-10 1 1
Chitinophaga_pinensis_DSM_2588 3 3
Flexibacter_litoralis_DSM_6794 19 13
Belliella_baltica_DSM_15883 9 3
Cyclobacterium_marinum_DSM_745 16 8
Marivirga_tractuosa_DSM_4126 21 10
Fibrella_aestuarina 5 5
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 1 1
Cytophaga_hutchinsonii_ATCC_33406 20 10
Spirosoma_linguale_DSM_74 8 7
Runella_slithyformis_DSM_19594 5 5
Parabacteroides_distasonis_ATCC_8503 1 1
Tannerella_forsythia_ATCC_43037 1 1
Odoribacter_splanchnicus_DSM_20712 6 3
Prevotella_melaninogenica_ATCC_25845 5 3
Prevotella_intermedia_17 5 3
Prevotella_denticola_F0289 7 5
Prevotella_ruminicola_23 4 2
Alistipes_finegoldii_DSM_17242 3 2
Bacteroides_salanitronis_DSM_18170 4 2
Bacteroides_helcogenes_P_36-108 7 3
Bacteroides_vulgatus_ATCC_8482 3 1
Bacteroides_thetaiotaomicron_VPI-5482 7 3
Bacteroides_fragilis_YCH46 3 1
Pedobacter_saltans_DSM_12145 2 2
Solitalea_canadensis_DSM_3403 7 6
Pedobacter_heparinus_DSM_2366 3 3
Sphingobacterium_sp._21 1 1
Fluviicola_taffensis_DSM_16823 32 16
Owenweeksia_hongkongensis_DSM_17368 9 5
Zunongwangia_profunda_SM-A87 3 2
Krokinobacter_sp._4H-3-7-5 8 6
Gramella_forsetii_KT0803 2 2
Lacinutrix_sp._5H-3-7-4 6 5
Maribacter_sp._HTCC2170 3 3
Robiginitalea_biformata_HTCC2501 2 2
Croceibacter_atlanticus_HTCC2559 3 2
Aequorivita_sublithincola_DSM_14238 12 6
Zobellia_galactanivorans 11 7
Muricauda_ruestringensis_DSM_13258 3 3
Cellulophaga_algicola_DSM_14237 19 13
Cellulophaga_lytica_DSM_7489 10 7
Flavobacteriaceae_bacterium_3519-10 1 1
Polaribacter_sp._MED152 13 7
Capnocytophaga_canimorsus_Cc5 3 1
Flavobacterium_indicum_GPTSA100-9 9 5
Flavobacterium_psychrophilum_JIP02/86 3 2
Flavobacterium_branchiophilum_FL-15 4 4
Flavobacterium_columnare_ATCC_49512 6 5
Flavobacterium_johnsoniae_UW101 7 5
Fibrobacter_succinogenes_subsp._succinogenes_S85 5 4
Waddlia_chondrophila_WSU_86-1044 6 4
Candidatus_Protochlamydia_amoebophila_UWE25 6 4
Parachlamydia_acanthamoebae_UV-7 26 14
Simkania_negevensis_Z 14 5
Chlamydophila_pecorum_E58 5 2
Chlamydia_muridarum_Nigg 4 2
Chlamydophila_pneumoniae_TW-183 4 2
Chlamydophila_caviae_GPIC 4 2
Chlamydophila_felis_Fe/C-56 4 2
Chlamydophila_abortus_S26/3 5 2
Chlamydia_psittaci_01DC11 4 2
Chlamydia_trachomatis_B/Jali20/OT 4 2
Pirellula_staleyi_DSM_6068 3 2
Akkermansia_muciniphila_ATCC_BAA-835 1 1
Turneriella_parva_DSM_21527 5 4
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 5 4
Leptospira_interrogans_serovar_Lai_str._IPAV 9 8
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 11 8
Spirochaeta_smaragdinae_DSM_11293 1 1
Sphaerochaeta_globus_str._Buddy 1 1
Elusimicrobium_minutum_Pei191 2 2
Streptobacillus_moniliformis_DSM_12112 4 2
Sebaldella_termitidis_ATCC_33386 27 15
Leptotrichia_buccalis_C-1013-b 9 5
Ilyobacter_polytropus_DSM_2926 6 2
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 44 31
Sulfurospirillum_deleyianum_DSM_6946 1 1
Sulfurospirillum_barnesii_SES-3 1 1
Sulfurimonas_autotrophica_DSM_16294 1 1
Helicobacter_hepaticus_ATCC_51449 6 5
Helicobacter_cinaedi_PAGU611 3 3
Sulfurovum_sp._NBC37-1 3 2
Syntrophus_aciditrophicus_SB 2 1
Syntrophobacter_fumaroxidans_MPOB 2 1
Desulfurivibrio_alkaliphilus_AHT2 1 1
Desulfotalea_psychrophila_LSv54 3 1
Desulfatibacillum_alkenivorans_AK-01 1 1
Desulfovibrio_salexigens_DSM_2638 2 1
Haliangium_ochraceum_DSM_14365 5 3
Sorangium_cellulosum_'So_ce_56' 1 1
Anaeromyxobacter_sp._Fw109-5 1 1
Anaeromyxobacter_dehalogenans_2CP-1 1 1
Stigmatella_aurantiaca_DW4/3-1 5 4
Corallococcus_coralloides_DSM_2259 10 5
Myxococcus_xanthus_DK_1622 4 3
Myxococcus_fulvus_HW-1 3 3
Chromobacterium_violaceum_ATCC_12472 1 1
Neisseria_meningitidis_alpha14 2 2
Neisseria_meningitidis_FAM18 2 2
Neisseria_lactamica_020-06 3 3
Neisseria_gonorrhoeae_NCCP11945 2 2
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1 1
Burkholderia_phymatum_STM815 2 1
Ralstonia_eutropha_JMP134 2 1
Ralstonia_eutropha_H16 2 1
Burkholderia_sp._RPE64 1 1
Burkholderia_sp._CCGE1002 2 1
Burkholderia_thailandensis_E264 2 2
Burkholderia_gladioli_BSR3 1 1
Ramlibacter_tataouinensis_TTB310 1 1
Polaromonas_naphthalenivorans_CJ2 1 1
Variovorax_paradoxus_S110 2 2
Herminiimonas_arsenicoxydans 2 1
Collimonas_fungivorans_Ter331 2 1
Herbaspirillum_seropedicae_SmR1 1 1
Bordetella_avium_197N 3 2
Methylotenera_versatilis_301 2 2
Magnetococcus_marinus_MC-1 1 1
Sphingobium_sp._SYK-6 1 1
Hirschia_baltica_ATCC_49814 1 1
Dinoroseobacter_shibae_DFL_12 3 1
Phaeobacter_gallaeciensis_2.10 4 1
Jannaschia_sp._CCS1 5 1
Ruegeria_sp._TM1040 4 1
Ruegeria_pomeroyi_DSS-3 4 1
Ketogulonicigenium_vulgare_Y25 4 1
Ketogulonigenium_vulgarum_WSH-001 4 1
Roseobacter_litoralis_Och_149 3 1
Roseobacter_denitrificans_OCh_114 4 1
Rhodobacter_sphaeroides_ATCC_17029 3 1
Rhodobacter_capsulatus_SB_1003 4 1
Paracoccus_denitrificans_PD1222 4 1
Azospirillum_lipoferum_4B 1 1
Azospirillum_sp._B510 3 2
Azospirillum_brasilense_Sp245 3 3
alpha_proteobacterium_HIMB5 2 2
Mesorhizobium_opportunistum_WSM2075 1 1
Mesorhizobium_loti_MAFF303099 1 1
Methylocystis_sp._SC2 3 1
Saccharophagus_degradans_2-40 1 1
Cellvibrio_japonicus_Ueda107 2 1
Haemophilus_somnus_129PT 1 1
Haemophilus_parainfluenzae_T3T1 1 1
Aliivibrio_salmonicida_LFI1238 1 1
Vibrio_fischeri_MJ11 1 1
Vibrio_splendidus_LGP32 1 1
Idiomarina_loihiensis_L2TR 3 1
Shewanella_loihica_PV-4 13 4
Shewanella_halifaxensis_HAW-EB4 2 2
Shewanella_pealeana_ATCC_700345 4 4
Shewanella_oneidensis_MR-1 22 6
Shewanella_baltica_OS185 20 5
Shewanella_woodyi_ATCC_51908 9 3
Shewanella_sp._MR-4 19 5
Shewanella_amazonensis_SB2B 5 1
Shewanella_putrefaciens_CN-32 17 6
Glaciecola_sp._4H-3-7+YE-5 3 1
Marinobacter_adhaerens_HP15 2 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 2 1
Marinobacter_aquaeolei_VT8 2 1
Alteromonas_sp._SN2 1 1
Kangiella_koreensis_DSM_16069 1 1
Hahella_chejuensis_KCTC_2396 2 1
Alcanivorax_borkumensis_SK2 3 2
Marinomonas_sp._MWYL1 1 1
Methylomonas_methanica_MC09 1 1
Nitrosococcus_oceani_ATCC_19707 4 1
Legionella_longbeachae_NSW150 1 1
gamma_proteobacterium_HdN1 11 6
Providencia_stuartii_MRSN_2154 1 1
Yersinia_pseudotuberculosis_IP_31758 2 1
Yersinia_pestis_Pestoides_F 3 1
Pectobacterium_atrosepticum_SCRI1043 3 1
Cronobacter_turicensis_z3032 1 1
Shigella_flexneri_5_str._8401 3 1
Salmonella_bongori_NCTC_12419 1 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 3 1
Enterobacter_sp._638 1 1
Citrobacter_rodentium_ICC168 4 2
Azotobacter_vinelandii_DJ 1 1
Pseudomonas_sp._TKP 3 1
Pseudomonas_sp._UW4 4 2
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 6 3
Pseudomonas_entomophila_L48 2 1
Pseudomonas_syringae_pv._tomato_str._DC3000 3 1
Pseudomonas_stutzeri_A1501 2 1
Pseudomonas_fulva_12-X 2 1
Pseudomonas_putida_F1 2 1
Pseudomonas_protegens_Pf-5 3 1
Pseudomonas_fluorescens_SBW25 3 1
Pseudomonas_mendocina_ymp 3 2
Pseudomonas_aeruginosa_UCBPP-PA14 3 2
Pseudomonas_sp._VLB120 3 1
Cycloclasticus_sp._P1 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   43 29
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   18 11
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   5 4
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   3 2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   2 1
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Histoplasma_capsulatum_H143 1 1
Histoplasma_capsulatum_H88 1 1
Histoplasma_capsulatum_G186AR 1 1
Aspergillus_fumigatus_A1163_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 10 8
Batrachochytrium_dendrobatidis_JAM81_ 10 7
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   17 10
Hordeum_vulgare_22   (Domesticated barley)   56 33
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   16 11
Trypanosoma_brucei_Lister_427_v4.1 39 17
Neospora_caninum_Nc-Liverpool_6.2 33 16
Plasmodium_falciparum_HB3_ 17 10
Plasmodium_falciparum_Dd2_ 17 10
Chamaesiphon_minutus_PCC_6605 3 1
Synechocystis_sp._PCC_6803_substr._PCC-P 3 1
Synechocystis_sp._PCC_6803_substr._PCC-N 3 1
Synechocystis_sp._PCC_6803_substr._GT-I 3 1
Synechocystis_sp._PCC_6803 3 1
Synechococcus_sp._PCC_7002 2 1
Crinalium_epipsammum_PCC_9333 1 1
Oscillatoria_nigro-viridis_PCC_7112 6 3
Oscillatoria_acuminata_PCC_6304 4 2
Arthrospira_platensis_NIES-39 2 1
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._PCC_7424 2 1
Cyanothece_sp._PCC_8801 3 1
Cyanobacterium_aponinum_PCC_10605 3 1
Cyanobacterium_stanieri_PCC_7202 2 1
Stanieria_cyanosphaera_PCC_7437 2 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Mycoplasma_bovis_PG45 1 1
Mycoplasma_fermentans_PG18 1 1
Mycoplasma_agalactiae 3 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Nocardia_brasiliensis_ATCC_700358 1 1
Clostridium_difficile_BI1 3 2
Clostridium_difficile_R20291 3 2
Clostridium_difficile_CD196 3 2
Coprococcus_catus_GD/7 2 1
Clostridium_autoethanogenum_DSM_10061 2 2
Clostridium_tetani_genome_12124569 1 1
Clostridium_botulinum_H04402_065 1 1
Clostridium_botulinum_F_str._230613 2 1
Clostridium_botulinum_F_str._Langeland 2 1
Clostridium_botulinum_B1_str._Okra 2 1
Clostridium_botulinum_Ba4_str._657 1 1
Clostridium_botulinum_A2_str._Kyoto 1 1
Clostridium_botulinum_A3_str._Loch_Maree 1 1
Clostridium_botulinum_A_str._Hall 2 1
Clostridium_botulinum_A_str._ATCC_19397 2 1
Lactobacillus_plantarum_16 1 1
Lactobacillus_plantarum_ZJ316 1 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1 1
Lactobacillus_plantarum_WCFS1 1 1
Streptococcus_constellatus_subsp._pharyngis_C1050 1 1
Streptococcus_constellatus_subsp._pharyngis_C818 1 1
Streptococcus_constellatus_subsp._pharyngis_C232 1 1
Streptococcus_intermedius_B196 1 1
Streptococcus_intermedius_C270 1 1
Streptococcus_anginosus_C238 1 1
Streptococcus_anginosus_C1051 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 1 1
Streptococcus_lutetiensis_033 1 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1 1
Streptococcus_equi_subsp._zooepidemicus 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1 1
Streptococcus_oligofermentans_AS_1.3089 1 1
Streptococcus_iniae_SF1 1 1
Streptococcus_parasanguinis_FW213 1 1
Streptococcus_pyogenes_HSC5 1 1
Streptococcus_pyogenes_A20 1 1
Streptococcus_pyogenes_MGAS1882 1 1
Streptococcus_pyogenes_MGAS15252 1 1
Streptococcus_pyogenes_Alab49 1 1
Streptococcus_pyogenes_MGAS10750 1 1
Streptococcus_pyogenes_MGAS10270 1 1
Streptococcus_pyogenes_MGAS2096 1 1
Streptococcus_pyogenes_MGAS9429 1 1
Streptococcus_pyogenes_MGAS6180 1 1
Streptococcus_pyogenes_NZ131 1 1
Streptococcus_pyogenes_MGAS8232 1 1
Streptococcus_pyogenes_MGAS10394 1 1
Streptococcus_pyogenes_MGAS315 1 1
Streptococcus_pyogenes_SSI-1 1 1
Streptococcus_pyogenes_M1_476 1 1
Streptococcus_pyogenes_MGAS5005 1 1
Streptococcus_pyogenes_M1_GAS 1 1
Streptococcus_pneumoniae_A026 1 1
Streptococcus_pneumoniae_ST556 1 1
Streptococcus_pneumoniae_SPNA45 1 1
Streptococcus_pneumoniae_SPN994039 1 1
Streptococcus_pneumoniae_SPN994038 1 1
Streptococcus_pneumoniae_SPN034183 1 1
Streptococcus_pneumoniae_SPN034156 1 1
Streptococcus_pneumoniae_INV104 1 1
Streptococcus_pneumoniae_INV200 1 1
Streptococcus_pneumoniae_OXC141 1 1
Streptococcus_pneumoniae_gamPNI0373 1 1
Streptococcus_pneumoniae_AP200 1 1
Streptococcus_pneumoniae_ATCC_700669 1 1
Streptococcus_pneumoniae_TCH8431/19A 1 1
Streptococcus_pneumoniae_CGSP14 1 1
Streptococcus_pneumoniae_G54 1 1
Streptococcus_pneumoniae_JJA 1 1
Streptococcus_pneumoniae_70585 1 1
Streptococcus_pneumoniae_Hungary19A-6 1 1
Streptococcus_pneumoniae_Taiwan19F-14 1 1
Streptococcus_pneumoniae_D39 1 1
Streptococcus_pneumoniae_670-6B 1 1
Streptococcus_pneumoniae_R6 1 1
Streptococcus_pneumoniae_TIGR4 1 1
Streptococcus_agalactiae_ILRI112 1 1
Streptococcus_agalactiae_ILRI005 1 1
Streptococcus_agalactiae_09mas018883 1 1
Streptococcus_agalactiae_2-22 1 1
Streptococcus_agalactiae_SA20-06 1 1
Streptococcus_agalactiae_GD201008-001 1 1
Streptococcus_agalactiae_NEM316 1 1
Streptococcus_agalactiae_2603V/R 1 1
Streptococcus_mutans_GS-5 1 1
Streptococcus_mutans_LJ23 1 1
Streptococcus_mutans_UA159 1 1
Streptococcus_thermophilus_MN-ZLW-002 1 1
Streptococcus_thermophilus_JIM_8232 1 1
Streptococcus_thermophilus_ND03 1 1
Streptococcus_thermophilus_CNRZ1066 1 1
Streptococcus_thermophilus_LMG_18311 1 1
Streptococcus_suis_T15 1 1
Streptococcus_suis_TL13 1 1
Streptococcus_suis_SC070731 1 1
Streptococcus_suis_S735 1 1
Streptococcus_suis_ST3 1 1
Streptococcus_suis_D9 1 1
Streptococcus_suis_SS12 1 1
Streptococcus_suis_D12 1 1
Streptococcus_suis_ST1 1 1
Streptococcus_suis_A7 1 1
Streptococcus_suis_JS14 1 1
Streptococcus_suis_BM407 1 1
Streptococcus_suis_SC84 1 1
Streptococcus_suis_GZ1 1 1
Streptococcus_suis_98HAH33 1 1
Streptococcus_suis_05ZYH33 1 1
Streptococcus_salivarius_CCHSS3 1 1
Streptococcus_salivarius_JIM8777 1 1
Paenibacillus_sp._Y412MC10 2 2
Paenibacillus_mucilaginosus_KNP414 3 2
Paenibacillus_mucilaginosus_K02 2 1
Paenibacillus_polymyxa_CR1 1 1
Paenibacillus_polymyxa_SC2 1 1
Paenibacillus_polymyxa_E681 1 1
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_cereus_ATCC_14579 1 1
Echinicola_vietnamensis_DSM_17526 10 3
Emticicia_oligotrophica_DSM_17448 4 4
Prevotella_sp._oral_taxon_299_str._F0039 3 1
Prevotella_dentalis_DSM_3688 5 3
Alistipes_shahii_WAL_8301 1 1
Bacteroides_xylanisolvens_XB1A 8 5
Bacteroides_fragilis_638R 7 3
Bacteroides_fragilis_NCTC_9343 4 1
Nonlabens_dokdonensis_DSW-6 6 5
Psychroflexus_torquis_ATCC_700755 9 6
Fibrobacter_succinogenes_subsp._succinogenes_S85 5 4
Chlamydia_pecorum_P787 5 2
Chlamydia_pecorum_W73 5 2
Chlamydia_pecorum_PV3056/3 4 2
Chlamydophila_pneumoniae_LPCoLN 4 2
Chlamydophila_pneumoniae_J138 4 2
Chlamydophila_pneumoniae_CWL029 4 2
Chlamydophila_pneumoniae_AR39 4 2
Chlamydia_psittaci_01DC12 4 2
Chlamydia_psittaci_WC 4 2
Chlamydia_psittaci_M56 4 2
Chlamydia_psittaci_WS/RT/E30 4 2
Chlamydia_psittaci_VS225 4 2
Chlamydia_psittaci_MN 4 2
Chlamydia_psittaci_GR9 4 2
Chlamydia_psittaci_84/55 4 2
Chlamydia_psittaci_08DC60 4 2
Chlamydia_psittaci_02DC15 4 2
Chlamydia_psittaci_C19/98 4 2
Chlamydia_psittaci_NJ1 4 2
Chlamydia_psittaci_CP3 4 2
Chlamydophila_psittaci_RD1 4 2
Chlamydia_psittaci_Mat116 4 2
Chlamydophila_psittaci_6BC 4 2
Chlamydophila_psittaci_6BC 4 2
Chlamydia_trachomatis_C/TW-3 4 2
Chlamydia_trachomatis_L2/434/Bu(f) 4 2
Chlamydia_trachomatis_L2/434/Bu(i) 4 2
Chlamydia_trachomatis_IU888 4 2
Chlamydia_trachomatis_IU824 4 2
Chlamydia_trachomatis_L2b/Canada2 4 2
Chlamydia_trachomatis_L2b/Canada1 4 2
Chlamydia_trachomatis_L3/404/LN 4 2
Chlamydia_trachomatis_L2b/Ams5 4 2
Chlamydia_trachomatis_L2b/Ams4 4 2
Chlamydia_trachomatis_L2b/Ams3 4 2
Chlamydia_trachomatis_L2b/Ams2 4 2
Chlamydia_trachomatis_L2b/Ams1 4 2
Chlamydia_trachomatis_L2b/795 4 2
Chlamydia_trachomatis_L2b/CV204 4 2
Chlamydia_trachomatis_L2b/LST 4 2
Chlamydia_trachomatis_L2b/UCH-2 4 2
Chlamydia_trachomatis_L2b/8200/07 4 2
Chlamydia_trachomatis_L2/25667R 4 2
Chlamydia_trachomatis_L1/224 4 2
Chlamydia_trachomatis_L1/115 4 2
Chlamydia_trachomatis_L1/440/LN 4 2
Chlamydia_trachomatis_K/SotonK1 4 2
Chlamydia_trachomatis_Ia/SotonIa3 4 2
Chlamydia_trachomatis_Ia/SotonIa1 4 2
Chlamydia_trachomatis_G/SotonG1 4 2
Chlamydia_trachomatis_F/SotonF3 4 2
Chlamydia_trachomatis_F/SW5 4 2
Chlamydia_trachomatis_F/SW4 4 2
Chlamydia_trachomatis_E/SotonE8 4 2
Chlamydia_trachomatis_E/SotonE4 4 2
Chlamydia_trachomatis_E/SW3 4 2
Chlamydia_trachomatis_D/SotonD6 4 2
Chlamydia_trachomatis_D/SotonD5 4 2
Chlamydia_trachomatis_D/SotonD1 4 2
Chlamydia_trachomatis_A/5291 4 2
Chlamydia_trachomatis_A/363 4 2
Chlamydia_trachomatis_RC-J/971 4 2
Chlamydia_trachomatis_RC-L2/55 4 2
Chlamydia_trachomatis_J/6276tet1 4 2
Chlamydia_trachomatis_RC-J/966 4 2
Chlamydia_trachomatis_RC-J(s)/122 4 2
Chlamydia_trachomatis_RC-F(s)/342 4 2
Chlamydia_trachomatis_RC-L2(s)/3 4 2
Chlamydia_trachomatis_RC-J/953 4 2
Chlamydia_trachomatis_RC-J943 4 2
Chlamydia_trachomatis_RC-Fs852 4 2
Chlamydia_trachomatis_RC-L2s46 4 2
Chlamydia_trachomatis_RC-F69 4 2
Chlamydia_trachomatis_L2c 4 2
Chlamydia_trachomatis_D-LC 4 2
Chlamydia_trachomatis_D-EC 4 2
Chlamydia_trachomatis_G/9301 4 2
Chlamydia_trachomatis_G/11074 4 2
Chlamydia_trachomatis_G/11222 4 2
Chlamydia_trachomatis_G/9768 4 2
Chlamydia_trachomatis_E/150 4 2
Chlamydia_trachomatis_E/11023 4 2
Chlamydia_trachomatis_B/TZ1A828/OT 4 2
Chlamydia_trachomatis_Sweden2 4 2
Chlamydia_trachomatis_E/Bour 4 2
Chlamydia_trachomatis_A2497 4 2
Chlamydia_trachomatis_A2497 4 2
Chlamydia_trachomatis_L2b/UCH-1/proctitis 4 2
Chlamydia_trachomatis_434/Bu 4 2
Chlamydia_trachomatis_A/HAR-13 4 2
Chlamydia_trachomatis_D/UW-3/CX 4 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 5 4
Leptospira_interrogans_serovar_Lai_str._56601 9 8
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 10 7
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 11 8
Treponema_pedis_str._T_A4 3 2
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 40 31
Fusobacterium_nucleatum_subsp._animalis_4_8 39 27
Campylobacter_jejuni_subsp._jejuni_00-2544 2 1
Campylobacter_jejuni_subsp._jejuni_00-2538 2 1
Campylobacter_jejuni_subsp._jejuni_00-2426 2 1
Campylobacter_jejuni_subsp._jejuni_00-2425 2 1
Campylobacter_jejuni_subsp._jejuni_PT14 2 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 2 1
Campylobacter_jejuni_subsp._jejuni_IA3902 2 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 2 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 2 1
Desulfocapsa_sulfexigens_DSM_10523 8 3
Desulfobacula_toluolica_Tol2 1 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1 1
Geobacter_sp._M18 1 1
Sorangium_cellulosum_So0157-2 1 1
Anaeromyxobacter_sp._K 1 1
Anaeromyxobacter_dehalogenans_2CP-C 1 1
Myxococcus_stipitatus_DSM_14675 3 2
Neisseria_meningitidis_WUE_2594 2 2
Neisseria_meningitidis_G2136 2 2
Neisseria_meningitidis_M04-240196 2 2
Neisseria_meningitidis_M01-240149 2 2
Neisseria_meningitidis_NZ-05/33 2 2
Neisseria_meningitidis_M01-240355 2 2
Neisseria_meningitidis_8013 1 1
Neisseria_meningitidis_053442 2 2
Neisseria_meningitidis_Z2491 2 2
Neisseria_meningitidis_H44/76 2 2
Neisseria_meningitidis_alpha710 2 2
Neisseria_meningitidis_MC58 2 2
Neisseria_gonorrhoeae_TCDC-NG08107 3 3
Neisseria_gonorrhoeae_FA_1090 3 3
Pandoraea_pnomenusa_3kgm 1 1
Ralstonia_solanacearum_FQY_4 1 1
Burkholderia_thailandensis_MSMB121 3 2
Burkholderia_pseudomallei_NCTC_13179 2 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1 1
Variovorax_paradoxus_B4 3 3
Variovorax_paradoxus_EPS 1 1
Phaeobacter_gallaeciensis_DSM_17395 4 1
Phaeobacter_gallaeciensis_DSM_26640 4 1
Leisingera_methylohalidivorans_DSM_14336 5 1
Octadecabacter_antarcticus_307 4 1
Octadecabacter_arcticus_238 4 1
Rhodobacter_sphaeroides_KD131 3 1
Rhodobacter_sphaeroides_ATCC_17025 3 1
Rhodobacter_sphaeroides_2.4.1 3 1
Paracoccus_aminophilus_JCM_7686 4 1
Candidatus_Pelagibacter_ubique_HTCC1062 1 1
Bradyrhizobium_sp._BTAi1 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 2 2
Haemophilus_somnus_2336 1 1
Vibrio_fischeri_ES114 1 1
Idiomarina_loihiensis_GSL_199 3 1
Shewanella_sp._W3-18-1 17 6
Shewanella_sp._ANA-3 18 5
Shewanella_baltica_BA175 18 5
Shewanella_baltica_OS678 18 5
Shewanella_baltica_OS117 18 5
Shewanella_baltica_OS223 16 4
Shewanella_baltica_OS195 18 5
Shewanella_baltica_OS155 18 5
Shewanella_sp._MR-7 19 5
Shewanella_putrefaciens_200 17 6
Alcanivorax_dieselolei_B5 4 2
Thioalkalivibrio_nitratireducens_DSM_14787 3 2
Yersinia_pseudotuberculosis_PB1/+ 2 1
Yersinia_pseudotuberculosis_YPIII 2 1
Yersinia_pseudotuberculosis_IP_32953 2 1
Yersinia_pestis_biovar_Microtus_str._91001 3 1
Yersinia_pestis_A1122 3 1
Yersinia_pestis_Z176003 3 1
Yersinia_pestis_D182038 3 1
Yersinia_pestis_D106004 3 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 3 1
Yersinia_pestis_Nepal516 3 1
Yersinia_pestis_Antiqua 3 1
Yersinia_pestis_Angola 3 1
Yersinia_pestis_CO92 3 1
Yersinia_pestis_KIM10+ 3 1
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 3 1
Shigella_flexneri_2002017 3 1
Shigella_flexneri_2a_str._2457T 3 1
Shigella_flexneri_2a_str._301 3 1
Salmonella_bongori_N268-08 1 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 3 1
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 3 1
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 3 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 3 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 3 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 3 1
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 3 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 3 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 3 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 3 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 3 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 3 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 3 1
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 3 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 3 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 3 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 3 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 3 1
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 3 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 3 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 3 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 3 1
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 3 1
Azotobacter_vinelandii_CA6 1 1
Azotobacter_vinelandii_CA 1 1
Pseudomonas_denitrificans_ATCC_13867 4 2
Pseudomonas_syringae_pv._phaseolicola_1448A 3 1
Pseudomonas_syringae_pv._syringae_B728a 3 1
Pseudomonas_stutzeri_CCUG_29243 2 1
Pseudomonas_stutzeri_DSM_10701 3 1
Pseudomonas_stutzeri_DSM_4166 2 1
Pseudomonas_stutzeri_RCH2 2 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 2 1
Pseudomonas_monteilii_SB3101 2 1
Pseudomonas_monteilii_SB3078 2 1
Pseudomonas_putida_H8234 3 1
Pseudomonas_putida_HB3267 2 1
Pseudomonas_putida_NBRC_14164 2 1
Pseudomonas_putida_DOT-T1E 3 1
Pseudomonas_putida_S16 2 1
Pseudomonas_putida_BIRD-1 2 1
Pseudomonas_putida_W619 3 1
Pseudomonas_putida_ND6 2 1
Pseudomonas_putida_KT2440 5 2
Pseudomonas_putida_GB-1 2 1
Pseudomonas_protegens_CHA0 3 1
Pseudomonas_poae_RE*1-1-14 3 1
Pseudomonas_fluorescens_F113 6 3
Pseudomonas_fluorescens_A506 4 2
Pseudomonas_fluorescens_R124 4 2
Pseudomonas_fluorescens_Pf0-1 6 3
Pseudomonas_resinovorans_NBRC_106553 2 1
Pseudomonas_mendocina_NK-01 4 2
Pseudomonas_aeruginosa_SCV20265 4 2
Pseudomonas_aeruginosa_MTB-1 3 2
Pseudomonas_aeruginosa_LES431 3 2
Pseudomonas_aeruginosa_RP73 3 2
Pseudomonas_aeruginosa_B136-33 3 2
Pseudomonas_aeruginosa_PA1R 4 2
Pseudomonas_aeruginosa_PA1 4 2
Pseudomonas_aeruginosa_DK2 3 2
Pseudomonas_aeruginosa_NCGM2.S1 3 2
Pseudomonas_aeruginosa_M18 3 2
Pseudomonas_aeruginosa_LESB58 3 2
Pseudomonas_aeruginosa_PA7 3 2
Pseudomonas_aeruginosa_PAO1 3 2
Cycloclasticus_zancles_7-ME 1 1
Candidatus_Methanomethylophilus_alvus_Mx1201 2 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   30 16
Pan_troglodytes_69_2.1.4   (Chimpanzee)   23 14
Gorilla_gorilla_69_3.1   (Western gorilla)   24 14
Pongo_abelii_69_2   (Sumatran orangutan)   24 14
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   26 15
Macaca_mulatta_69_1   (Rhesus monkey)   22 15
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   27 15
Otolemur_garnettii_69_3   (Small-eared galago)   26 15
Microcebus_murinus_69_1   (Gray mouse lemur)   19 13
Rattus_norvegicus_69_3.4   (Norway rat)   25 13
Mus_musculus_69_38   (House mouse)   28 15
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   16 11
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   20 12
Cavia_porcellus_69_3   (Domestic guinea pig)   27 15
Oryctolagus_cuniculus_69_2   (Rabbit)   24 14
Ochotona_princeps_69   (American pika)   16 12
Tupaia_belangeri_69   (Northern tree shrew)   13 9
Sus_scrofa_69_10.2   (Pig)   23 14
Bos_taurus_69_3.1   (Cattle)   25 15
Vicugna_pacos_69_1   (Alpaca)   6 5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   23 14
Mustela_putorius_furo_69_1.0   (Domestic ferret)   27 15
Ailuropoda_melanoleuca_69_1   (Giant panda)   26 15
Canis_familiaris_69_3.1   (Dog)   23 14
Felis_catus_69   (Domestic cat)   17 12
Equus_caballus_69_2   (Horse)   24 15
Myotis_lucifugus_69_2.0   (Little brown bat)   24 14
Pteropus_vampyrus_69_1   (Large flying fox)   20 13
Sorex_araneus_69_1   (European shrew)   10 8
Erinaceus_europaeus_69   (Western European hedgehog)   13 8
Procavia_capensis_69_1   (Cape rock hyrax)   20 11
Loxodonta_africana_69_3   (African savanna elephant)   25 16
Echinops_telfairi_69   (Small Madagascar hedgehog)   14 10
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   10 7
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   8 6
Macropus_eugenii_69_1.0   (Tammar wallaby)   23 14
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   25 15
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   30 16
Ornithorhynchus_anatinus_69_5   (Platypus)   18 12
Petromyzon_marinus_69_7.0   (Sea lamprey)   11 8
Meleagris_gallopavo_69_2   (Turkey)   21 12
Gallus_gallus_69_2   (Chicken)   24 14
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   17 12
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   18 10
Anolis_carolinensis_69_2.0   (Green anole)   22 13
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   21 12
Latimeria_chalumnae_69_1   (Coelacanth)   25 15
Gadus_morhua_69_1   (Atlantic cod)   20 13
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   28 18
Takifugu_rubripes_69_4   (Torafugu)   30 18
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   22 13
Oryzias_latipes_69_1   (Japanese medaka)   21 12
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   25 15
Oreochromis_niloticus_69_1.0   (Nile tilapia)   25 15
Danio_rerio_69_9   (Zebrafish)   26 15
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   9 6
Ciona_intestinalis_69   (Vase tunicate)   13 8
Drosophila_melanogaster_69_5   (Fruit fly)   12 8
Caenorhabditis_elegans_69_215   (Roundworm)   2 1
Arabidopsis_thaliana_10   (Thale cress)   23 15

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   105 66
Homo_sapiens__(NCBI_version)   (Human)   38 21
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   28 15
Loa_loa_v3.3_(Request)   (Eye worm)   4 2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   4 2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   4 2
Lotus_japonicus__(Early_assembly) 20 16
Malus_x_domestica_(Duplicate)   (Apple)   33 23
Ricinus_communis__(Early_assembly)   (Castor bean)   16 11
Nicotiana_benthamiana_0.4.4_(Early_draft) 44 29
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   23 16
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   23 16
Phoenix_dactylifera__(Early_draft)   (Date palm)   13 12
NCBI_plasmid_sequences_(Plasmids) 20 11
PDB_chains_(SCOP_1.75)_(PDB) 8 8
NCBI_viral_sequences_(Viral) 248 163
Protozoadb_2010_08_(Protozoadb) 714 367
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 72 72
STRING_v9.0.5_(STRING) 2590 1503
UniProt__viral_sequences_(Viral) 18 18
Uniprot_2018_03_genome 48949 29003
NCBI_2017_08_genome 93827 58536
TargetDB__(Targets) 165 90
Protein_Data_Bank_(all_PDB_sequenc) 42 42

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