SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for GSADVT00040561001 from Adineta vaga

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  GSADVT00040561001
Domain Number 1 Region: 58-173
Classification Level Classification E-value
Superfamily BRCT domain 5.38e-21
Family BRCT domain 0.052
Further Details:      
 
Domain Number 2 Region: 192-281
Classification Level Classification E-value
Superfamily BRCT domain 1.03e-20
Family DNA ligase 0.032
Further Details:      
 
Domain Number 3 Region: 346-433
Classification Level Classification E-value
Superfamily BRCT domain 0.00000000000000727
Family DNA topoisomerase II binding protein 1, TopBP1 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) GSADVT00040561001
Sequence length 643
Comment pep supercontig:AMS_PRJEB1171_v1:HG380977:50359:52952:-1 gene:GSADVG00040561001 transcript:GSADVT00040561001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSIFVLQPNTLHSQWQGEKLNNVYQLLESSNFKPNMIDEDTMMNMKNLKGKMFVIEPFSG
QLFQYLKNNKAWVLGPQLITTCVDHNITIPCSSYPLYSLAMQSLTICCTNLSHADREIIR
RSVAYMGGKFQTNLNANVTHLICGTCAASEKYFVAVENGIQVMMPEWIQNVLALSGQKTV
KGTDSMFDRFKCPLFYKFIISLSGFAERDRNTIKQYVEREGATYSPSLIKDQCTHLICKE
PKGSKFEHAIKWRIPTLKPEWIFESSEKGSCLRLNNFLWSAPTIDSNCSKENEKPISKDM
VDSLSSKMTPIEQPRKSTSLLTTEELIELEERFDKWMNDRSKKIIDDLFDGLKVYLGQFP
ANLRMRMQKILDGGCATRFDTLNPTVTHVIRGSEPAINYAHISTLAPNAHIVHPQWLLDC
CEKCELISEMIYSASNDRDDKQDSNLSLTNDRKRSSNSNLSTPSTISFTRQQTSSFNVDQ
TVLQDDTPRLRRTPGSSASTPSIIPEYALSPFSLLKRYSNVPRPPVFEESLTDTQIDKIS
AQLPPTESQLNVHRLMSDIDCLMPTFLNQKSSSNPIINSSSRMNKMPTHSFFLAQQAKLV
IKNDELSSEVKVSWVDDSTEAERLRQYQLHNLDEMTQLDDDDY
Download sequence
Identical sequences GSADVT00040561001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]