SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000002864 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSFALP00000002864
Domain Number - Region: 191-219
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00195
Family Classic zinc finger, C2H2 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000002864   Gene: ENSFALG00000002746   Transcript: ENSFALT00000002876
Sequence length 799
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603184.1:5764916:5773646:1 gene:ENSFALG00000002746 transcript:ENSFALT00000002876 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTSLAPIQSKTITLSQPVGRNSGIPGLGIINPQIISIQPVSGTEQQQLFLHSSSESPVQL
LMQRPLPSHESVSVDKVPPSKMVNGQRNTCATASASRSPNPTVAAASSASTPCLEKKQKD
DKLKKSLKVKTRSGRISRPPKYKAKDYKFIKMEDLADGHQSDSDDYSELSIEDDEEGKVK
GKDALFSSSNYNLKPKTFKCQTCEKSYIGKGGLARHYKLNPDHGELESSPPKIPLNKPNG
SIFVEEKMMSPAHLDSTAVTLNHEKVLATSLQETVDSKAGEQKSFSFNIEMTLNILQQEL
MQLLARKKYLFRCRGIRFITCLCNCEVVLRKISRPGQSPSKSLSSVSAEHKVFRRKARLK
ELIQQCDNEDLMELALPRLTKLVTVYEFLLMKVEKGHPAKAYFPDVYREFEDLHNMVKKM
AYDHLSNSDSVNCQQPVEIKDTKVAESLGITEILSGEQKMQGAGSYSQCAIKMVSEQVAV
DILGQKRLTESSGEELLPPAKRTKLEDITENVNNAYASQDEKFKQKFKCFHQLTKSFNPL
NGEILLSEDRHITCCTTGSTLQTAEENNSLAESGVRLDGENSGTSSQTVEMRIEYPQPVS
MQGPDVAGEASLLHTEVVLPVKTSSAGLVQAHFVSGSAVGGPAAPELHSSMSEQALARQS
TGPPTNVSDEIQELEKAFSTNLVPINYPHSAQAESHQNAVQGASLSAHGNQENAFKNQSE
YSCGTGEAHELANTVTVDETVAFEISDESHDFLSQGQEQIFIQTSDGLILSHPGTGVLSQ
AEGIVIVTDSNGTTMHIRT
Download sequence
Identical sequences U3JJB0
ENSFALP00000002864

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]