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  Home > Genomes > Ficedula albicollis 76_1.0 > ENSFALP00000003001

Domain assignment for ENSFALP00000003001 from Ficedula albicollis 76_1.0

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSFALP00000003001
Domain Number 1 Region: 1821-1895
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.09e-33
Family Classic zinc finger, C2H2 0.0000546
Further Details:      
 
Domain Number 2 Region: 1999-2049
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000108
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 3 Region: 2246-2294
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000137
Family Classic zinc finger, C2H2 0.024
Further Details:      
 
Weak hits

Sequence:  ENSFALP00000003001
Domain Number - Region: 1953-2007
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000813
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number - Region: 2138-2185
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00268
Family Classic zinc finger, C2H2 0.026
Further Details:      
 
Domain Number - Region: 473-496,546-571
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00326
Family Classic zinc finger, C2H2 0.025
Further Details:      
 
Domain Number - Region: 1418-1443
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0038
Family Classic zinc finger, C2H2 0.034
Further Details:      
 
Domain Number - Region: 2353-2379
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00504
Family Classic zinc finger, C2H2 0.021
Further Details:      
 
Domain Number - Region: 105-132
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00904
Family Classic zinc finger, C2H2 0.049
Further Details:      
 
Domain Number - Region: 791-819
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0225
Family Classic zinc finger, C2H2 0.031
Further Details:      
 
Domain Number - Region: 833-864
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0298
Family Classic zinc finger, C2H2 0.045
Further Details:      
 
Domain Number - Region: 1054-1094
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.053
Family Classic zinc finger, C2H2 0.039
Further Details:      
 
Domain Number - Region: 162-187
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0858
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number - Region: 1609-1634
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0894
Family Classic zinc finger, C2H2 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000003001   Gene: ENSFALG00000002876   Transcript: ENSFALT00000003014
Sequence length 2447
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603362.1:41100:129823:-1 gene:ENSFALG00000002876 transcript:ENSFALT00000003014 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MEVLQCDGCDFRAPSYEDLKAHIQDVHTAFLQPTDVSEESPTQPRSGSINASNQTEVEFS
SVKDEFAIADDIGQNATSQMGTGSYYSQSQTFYGQHMAPNPKPTSKFFQCKFCVRYFRSK
NLLIEHTRKVHGAQAGGSSVGPPASSSLNYNIMMHEGFGKVFSCQFCTYKSPRRARIIKH
QKMYHKNNLKESSAPSAAAAAAAAVSESTSASVPVQEPCKELPAEVVERSILESMVKPLT
KSRGNFCCEWCSYQTPRRERWCDHMMKKHRSMVKILSSLRQQQDGTSAPEVQSKSAQSAS
PNSNYMSMNTTGREMSSANVSNFRGSMGNSLIRPNSSTSSKFSSVSYPQMKPKSPHNSGM
VNLSDRSRYGIADMTNSSADLETSSMLNDSSSDEELNEMDSENGLNSMDHQTSGMSAEQL
MGSDGNKLLETKGIPFRRYMNRFQCPFCPFLTMHRRSISRHIENIHLSGKTAVYKCDECP
FTCKSSLKLGAHKQCHTGTTSDWDTMNSQAESIASSLNDSTVSYESGNINGRKSAGMMEP
ESPQPHSQHPYKCTLCNYSTTTLKGLRVHQQHKHSFCDNLPKYDGPPSNAPQESEADAHS
SASTVKKSQTSILGLSSKNNFVAKAPRKVSNDFPLDLSPVKKRTRIDEIASNLQSKISQN
KQQEDAVINVEDDEEEEEDNEVEIEVELDREEEQTEPMMEVSSSYAPQQMWGREANDSQK
ETSFRGMQHDYSSTNGAEIELTLSEDEEDYYSAVSMKDHQSPNASVLGSQSNMYGTDQNN
ENSEFTDTGRLYYCKHCDFSNKSARSVSTHYQRMHPYIKFSFRYILDPNDHSAVYRCLEC
YIDYTNFEDLQQHYGEHHPEAMNVLNFDHSDLIYRCRFCSYTSPNVRSLMPHYQRMHPTV
KINNAMIFSSYVVEQQEGLNTESQTLREILNSAPKTMATSTPVARGTGVPAGFNKSATKS
FSPECENQKEPSVNTVVVYDCDVCSFASPNMHSVLVHYQKKHPEEKASYFRIQKTMRVVS
VDRGSALAQMSFELGAPISPKLSNLASQPAAPAPPPPDLSTELYYCKHCSYSNRSVVGVL
VHYQKRHPEIKVTAKYIRQAPPTAAMMRAGELPPGIQRPPVSMQQLGRGGSETSVNPPEN
EMFFCQHCDYGNRTVKGVLIHYQKKHRDFKANADVIRQHTATIRSLCDRGQKKSVGSLPA
HSSGTERDKSKLRALKCRQCSYTSPYFYALRKHIKKDHPNLKATVTSILRWAFLDGLIEA
GYHCEWCIYSHTEPSGLLVHYQRRHPEHYVDYTYMATKLWAGPDPSPPALAMPTEMKTYK
CRDCIFEASSIWDITNHYQAFHPWAMNGDESVLLDIIKEKDTSEKTMPQPDEGGVRMDSE
DQIATPQMDQDPECAEDPSLSHEKTVQLASANPAISSTPYQCTVCQSEYNNLHGLLTHYG
KKHPGMKVKAADFAQDIDINPGAVYKCRHCPYINTRIHGVLTHYQKRHPSVKVTAEDFVH
DVEQSTDIAQNDVEETSRIFKQGYGAYRCKLCPYTHGTLEKLKIHYEKYHNQPEFDVFAQ
SPPKVSASVEPDMVTEIKASPEIAAEDVGEVSMPAPHFSSSHLVSHTVFRCQLCKYFCST
RKGIARHYRIKHNNVRAQPEGKNNLFKCALCSYTNPIRKGLAAHYQKRHDIDAYYTHCLA
ASRTVSDKPNKVIIPSPPKDDTPQLSEELRRAVEKKKCSLCSFQSFSKKGIVSHYMKRHP
GVFPKKQHASKLGGYFTAVYADEHEKPAPAEERNDFEKPEVEAEAQEIEWLPFRCIKCFK
LSFSTAELLCMHYTDHHSKDLKRDFSILGSGTRSQSPVYQCKHCDTKLHSTAELTAHLNG
HNEEFQKRAKRQERRKQLLSKQKYADGAFADFKQERAYGHLEDVSKLKERKVVGYKCKFC
VEVHPTLRAICNHLRKHVQYGNVSSVSATVKGLRSHERSHLALAMFAREDKYSCQYCSFV
SAFRHNLDRHMQTHHGHHKPFRCKLCPFKSSYNSRLKTHILKAHAGEHAYKCSSCSFSTM
TISQLKEHSLKVHGKALTLPRPRIVNLAASHAHHTSKNHTPAEEVEDSNDSSYSEPPDVQ
QQLNHYQSAALARNNNNISPIPLSGSAAGVEKAEAILNCEFCEFSSGYIQSIRRHYRDKH
GGKKLFKCKDCSFYTGFKSAFTMHVEAGHSAVPEEGPKDLRCPLCLYHTKYKRNMIDHIV
LHREERVVPIEVCRSKLSKYLQGVVFRCDKCTFTCSSDESLQQHIEKHNELKPYKCQLCY
YETKHTEELDAHLRDEHKVSRNFELVGRVNLDQLEQMKGKTESSSSDEEEKEEELSPKAQ
ERDPMMFPDSSAPEKRFPCEFCGRSFTEGSEWERHVLRHGMALNESKHRSGEDSQPKEDM
EETASTLPEEKEGIETMVVDYSHGGETAVSMVAADQPLLDTPEAKNE
Download sequence
Identical sequences U3JJP7
ENSFALP00000003001

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.