SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000008932 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSFALP00000008932
Domain Number - Region: 593-688
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 0.00942
Family Apolipoprotein A-I 0.017
Further Details:      
 
Domain Number - Region: 289-377
Classification Level Classification E-value
Superfamily Apolipoprotein A-I 0.0222
Family Apolipoprotein A-I 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000008932   Gene: ENSFALG00000008528   Transcript: ENSFALT00000008970
Sequence length 797
Comment pep:novel scaffold:FicAlb_1.4:JH603177.1:15178993:15188697:1 gene:ENSFALG00000008528 transcript:ENSFALT00000008970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MELGNISKPTYGAGPEAPGSSTPGLVTMAHGFLRLVQPNPLPIELINFGQSQSAFTREDI
HELLLYELGFLVCAAIGVLFIILVPLVGCCFCCCRCCGRCGGRMYQKQGGRTGCRRRALC
ASVLLVSALLLAGGVCALISNARFSQAVKSTFPSVNSTMDDVHTYVASIPRQIDFIISKS
DVPLDYANSSLQDIGPNLGIMITSRIRSSTDAALGSLQSLLQGMETLKDTFGSINISRSV
LEELQSNYSQELASLQDRLNLTLQNCGLPCSQVSLAGLTFTANFSTIPGVEQQLEALSQV
SGSNITADLEEVNRTLDTVPEKVQEQSQEVVAKSQDQLGLIRQEIRSLQEGFPLLDVEEK
VGAFVSNATAALEEYREPIIAWDGLRLILCAILCCMVLLVVLCNFFGLLLGPLGLKEGVL
PTQRSSLSDAGGNFFMAGVGFSFIFSWLLMLLVMIIFLLGGNIYMLVCESWNNQQLLQLL
DTPGVIPNFNLSEVLGLKGDTANFSEIYRQCQQDASLWKTLHLDQSVSLDELLNISQYTG
DISTAFEKMNITLSPISLLNQSQKDLLLKASQAGQPPNFTLTLEQLDQNITQRSLLDLAA
ELEQLAEKMDADVKRDLEEKAHELRELEKEMQASFSGPLQGLKENIHSVQSGAAQLEGQT
TAVLDKANETQEFLEREMPNLIKNETRAFLEKLLDFFETYISWAKSSVTEEWARCKPIAQ
SLDDVETIGCDYIMDSVNAFWFSLGWCTLFLLPSIILAVRLAKFYRRMDIADVYRNEEFE
MPPTFNSYKIPRPSTRH
Download sequence
Identical sequences U3K1M8
ENSFALP00000008932

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]