SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000013218 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000013218
Domain Number 1 Region: 2-86
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.74e-26
Family Cold shock DNA-binding domain-like 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000013218   Gene: ENSFALG00000012668   Transcript: ENSFALT00000013274
Sequence length 88
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603343.1:116723:117157:1 gene:ENSFALG00000012668 transcript:ENSFALT00000013274 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDI
PGVRFKVVKVANVSLLALYKGKKERPRS
Download sequence
Identical sequences A0A087R6G3 A0A091LHX3 A0A091N213 A0A091Q3V5 A0A091UCE8 A0A091UPB7 A0A091WGU0 A0A093EXE8 A0A093I8N4 A0A093PK78 A0A093R3T3 A0A099Z3D5 A0A0A0AP39 A0A226PT98 R0M108 U3KDW4
ENSFALP00000013218 ENSEEUP00000007366 XP_009079382.1.14518 XP_009490278.1.14425 XP_009582878.1.87690 XP_009706941.1.71050 XP_009805450.1.37116 XP_009876891.1.31609 XP_009924632.1.2804 XP_009959053.1.99599 XP_009964489.1.75343 XP_009981052.1.11325 XP_010125542.1.88979 XP_010137443.1.100080 ENSCHOP00000005990 ENSFCAP00000008193 ENSEEUP00000007366 ENSCHOP00000005990 9685.ENSFCAP00000008193

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]