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Domain assignment for gi|378770954|ref|YP_005170687.1| from Mycobacterium bovis BCG str. Mexico

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|378770954|ref|YP_005170687.1|
Domain Number 1 Region: 285-396
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 0.0000000000000858
Family Aclacinomycin methylesterase RdmC 0.029
Further Details:      
 
Domain Number 2 Region: 104-163
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.00000000000224
Family Sigma4 domain 0.01
Further Details:      
 
Domain Number 3 Region: 9-87
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 0.00000000000824
Family Sigma2 domain of RNA polymerase sigma factors 0.0087
Further Details:      
 
Domain Number 4 Region: 175-279
Classification Level Classification E-value
Superfamily NTF2-like 0.000000384
Family Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|378770954|ref|YP_005170687.1|
Sequence length 401
Comment RNA polymerase sigma factor [Mycobacterium bovis BCG str. Mexico]
Sequence
MSQHDPVSAAWRAHRAYLVDLAFRMVGDIGVAEDMVQEAFSRLLRAPVGDIDDERGWLIV
VTSRLCLDHIKSASTRRERPQDIAAWHDGDASVSSVDPADRVTLDDEVRLALLIMLERLG
PAERVVFVLHEIFGLPYQQIATTIGSQASTCRQLAHRARRKINESRIAASVEPAQHRVVT
RAFIEACSNGDLDTLLEVLDPGVAGEIDARKGVVVVGADRVGPTILRHWSHPATVLVAQP
VCGQPAVLAFVNRALAGVLALSIEAGKITKIHVLVQPPALDLYGLLSPRADRHLLARPEF
KAMFLDDLLNGSRKQLAAPFADVIAFARDWGFRLDEVKVPVRWWHGDHDHIVPFSHGEHV
VSRLPDAKLLHLPGESHLAGLGRGEEILSTLMQIWDRDLRK
Download sequence
Identical sequences A0A0H3M5G5
410289.BCG_1251 gi|121637120|ref|YP_977343.1| gi|378770954|ref|YP_005170687.1| gi|449063256|ref|YP_007430339.1| WP_011799163.1.12187 WP_011799163.1.16973 WP_011799163.1.26265 WP_011799163.1.30732 WP_011799163.1.32822 WP_011799163.1.58000 WP_011799163.1.66013 WP_011799163.1.74477 WP_011799163.1.78848 WP_011799163.1.83704 WP_011799163.1.97596 WP_011799163.1.99269

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