SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 1c06A from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  1c06A
Domain Number 1 Region: 2-159
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 1.68e-60
Family Ribosomal protein S4 0.0000000862
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1c06A   PDB: 1c06   SUPERFAMILY: 1c06A
Sequence length 159
Comment (A:)
Sequence
mklseyglqlqekqklrhmygvnerqfrktfeeagkmpgkhgenfmillesrldnlvyrl
glartrrqarqlvthghilvdgsrvnipsyrvkpgqtiavreksrnlqvikealeannyi
pdylsfdpekmegtytrlperselpaeinealivefysr
Download sequence
Identical sequences 001549721|e1c05A1|221.1.2.19|A:1-159 001549722|e1c06A1|221.1.2.19|A:1-159 001549809|e1eg0A1|221.1.2.19|A:1-159 001550217|e1qd7C1|221.1.2.19|C:1-159 d1c05a_ d1c06a_ 1c05_A 1c06_A 1eg0_A 1qd7_C 1c06A

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]