SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1cdwA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1cdwA
Domain Number 1 Region: 91-175
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 7.6e-55
Family TATA-box binding protein (TBP), C-terminal domain 0.02
Further Details:      
 
Domain Number 2 Region: 6-85
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 1.35e-53
Family TATA-box binding protein (TBP), C-terminal domain 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1cdwA   PDB: 1cdw
Sequence length 179
Comment (A:)
Sequence
sgivpqlqnivstvnlgckldlktialrarnaeynpkrfaavimrireprttalifssgk
mvctgakseensrlaarkyarvvqklgfpakfldfkiqnmvgscdvkfpirleglvlthq
qfssyepelfpgliyrmikprivllifvsgkvvltgakvraeiyeafeniypilkgfrk
Download sequence
Identical sequences 1cdw_A 1cdwA

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