SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1e6vB from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1e6vB
Domain Number 1 Region: 190-439
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 6.71e-212
Family Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 0.000045
Further Details:      
 
Domain Number 2 Region: 6-188
Classification Level Classification E-value
Superfamily Methyl-coenzyme M reductase subunits 1.2e-114
Family Methyl-coenzyme M reductase alpha and beta chain N-terminal domain 0.00000436
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1e6vB   PDB: 1e6v
Sequence length 443
Comment (B:)
Sequence
mareakdtvdlyddrgncvaeevpievlspmrneaiqsivndikrtvavdlegienalqn
atvggkgmkipgremdvdivdnaeaiadeiekmirvyqdddtnvepmydgkrllvqlpse
rvkvmadpysgtlqagmavvhaiidvcevdmwdanmvkaavfgrypqtidyfggnvasml
dvpmkqegvgyalrnimvnhivaatrkntmqavclaatlqqtamfemgdalgpferlhll
gyayqglnadnmvydivkkhgkegtvgtvvrevveraledgvievkeelpsfkvykandm
dlwnayaaaglvaavmvnqgaaraaqgvsatilyyndlleyetglpgvdfgraegtavgf
sffshsiyggggpgifhgnhivtrhskgfaippvaaamaldagtqmfspevtskligdvf
geidefrepmkyiteaaaeeakr
Download sequence
Identical sequences 1e6vB 1e6v_B 1e6v_E

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