SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1ej9A from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1ej9A
Domain Number 1 Region: 1-228
Classification Level Classification E-value
Superfamily Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment 5.86e-109
Family Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment 0.000000000317
Further Details:      
 
Domain Number 2 Region: 230-438,510-562
Classification Level Classification E-value
Superfamily DNA breaking-rejoining enzymes 2.38e-92
Family Eukaryotic DNA topoisomerase I, catalytic core 0.0000000002
Further Details:      
 
Domain Number 3 Region: 439-510
Classification Level Classification E-value
Superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain 3.44e-24
Family Eukaryotic DNA topoisomerase I, dispensable insert domain 0.0000158
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1ej9A   PDB: 1ej9
Sequence length 563
Comment (A:)
Sequence
wkwweeerypegikwkflehkgpvfappyeplpenvkfyydgkvmklspkaeevatffak
mldheyttkeifrknffkdwrkemtneekniitnlskcdftqmsqyfkaqtearkqmske
eklkikeenekllkeygfcimdnhkerianfkieppglfrgrgnhpkmgmlkrrimpedi
iincskdakvpspppghkwkevrhdnkvtwlvswteniqgsikyimlnpssrikgekdwq
kyetarrlkkcvdkirnqyredwkskemkvrqravalyfidklalragnekeegetadtv
gccslrvehinlhpeldgqeyvvefdflgkdsiryynkvpvekrvfknlqlfmenkqped
dlfdrlntgilnkhlqdlmegltakvfrtynasitlqqqlkeltapdenipakilsynra
nravailcnhqiappktfeksmmnlqtkidakkeqladarrdlksakadakvmkdaktkk
vveskkkavqrleeqlmklevqatdreenkqialgtsklnfldpritvawckkwgvpiek
iynktqrekfawaidmadedyef
Download sequence
Identical sequences 1ej9_A 1ej9A

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