SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1jfiC from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1jfiC
Domain Number 1 Region: 95-179
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 8.2e-55
Family TATA-box binding protein (TBP), C-terminal domain 0.02
Further Details:      
 
Domain Number 2 Region: 10-89
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 5.24e-54
Family TATA-box binding protein (TBP), C-terminal domain 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1jfiC   PDB: 1jfi
Sequence length 185
Comment (C:)
Sequence
gshmsgivpqlqnivstvnlgckldlktialrarnaeynpkrfaavimrireprttalif
ssgkmvctgakseeqsrlaarkyarvvqklgfpakfldfkiqnmvgscdvkfpirleglv
lthqqfssyepelfpgliyrmikprivllifvsgkvvltgakvraeiyeafeniypilkg
frktt
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Identical sequences 1jfi_C 1jfiC

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