SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1ld4M from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1ld4M
Domain Number 1 Region: 1-292
Classification Level Classification E-value
Superfamily Viral glycoprotein, central and dimerisation domains 8.78e-144
Family Viral glycoprotein, central and dimerisation domains 0.068
Further Details:      
 
Domain Number 2 Region: 293-391
Classification Level Classification E-value
Superfamily E set domains 5.7e-66
Family Class II viral fusion proteins C-terminal domain 0.0078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1ld4M   PDB: 1ld4   SUPERFAMILY: 1ld4M
Sequence length 439
Comment (M:)
Sequence
yehattvpnvpqipykalveragyaplnleitvmssevlpstnqeyitckfttvvpspki
kccgslecqpaahadytckvfggvypfmwggaqcfcdsensqmseayvelsadcasdhaq
aikvhtaamkvglrivygnttsfldvyvngvtpgtskdlkviagpisasftpfdhkvvih
rglvynydfpeygamkpgafgdiqatsltskdliastdirllkpsaknvhvpytqassgf
emwknnsgrplqetapfgckiavnplravdcsygnipisidipnaafirtsdaplvstvk
cevsectysadfggmatlqyvsdregqcpvhshsstatlqestvhvlekgavtvhfstas
pqanfivslcgkkttcnaeckppadhivstphkndqefqaaisktswswlfalfggassl
liiglmifacsmmltstrr
Download sequence
Identical sequences 1ld4_M 1ld4_N 1ld4_O 1ld4_P 3j0f_E 3j0f_F 3j0f_G 3j0f_H 1ld4M

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