SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1qj5A from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1qj5A
Domain Number 1 Region: 8-421
Classification Level Classification E-value
Superfamily PLP-dependent transferases 4.19e-235
Family GABA-aminotransferase-like 0.00000000236
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1qj5A   PDB: 1qj5   SUPERFAMILY: 1qj5A
Sequence length 429
Comment (A:)
Sequence
MTTDDLAFDQRHILHPYTSMTSPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYN
HPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAM
KMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQS
RMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGI
LLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGE
AGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVR
VLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRA
VQDETFFCQ
Download sequence
Identical sequences 316385.ECDH10B_0842 595496.BWG_0626 gi|170080433|ref|YP_001729753.1| 1qj5A 1mly_A 1mly_B 1mlz_A 1mlz_B 1qj3_A 1qj3_B 1qj5_A 1qj5_B WP_012305461.1.10188 WP_012305461.1.21057 WP_012305461.1.28697 WP_012305461.1.33424 WP_012305461.1.37261 WP_012305461.1.38636 WP_012305461.1.39365 WP_012305461.1.40317 WP_012305461.1.40548 WP_012305461.1.47634 WP_012305461.1.49531 WP_012305461.1.53012 WP_012305461.1.53020 WP_012305461.1.55825 WP_012305461.1.6066 WP_012305461.1.68797 WP_012305461.1.72910 WP_012305461.1.91340 WP_012305461.1.93755 d1qj5a_ d1qj5b_ gi|238900032|ref|YP_002925828.1|

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