SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1v9fA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1v9fA
Domain Number 1 Region: 76-322
Classification Level Classification E-value
Superfamily Pseudouridine synthase 3.89e-79
Family Pseudouridine synthase RsuA/RluD 0.000000000352
Further Details:      
 
Domain Number 2 Region: 16-68
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 0.00000000000631
Family Ribosomal protein S4 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1v9fA   PDB: 1v9f   SUPERFAMILY: 1v9fA
Sequence length 325
Comment (A:)
Sequence
aqrvqltatvsenqlgqrldqalaemfpdysrsrikewildqrvlvngkvcdkpkekvlg
geqvainaeieeearfepqdipldivyedediiiinkprdlvvhpgagnpdgtvlnallh
yyppiadvpragivhrldkdttglmvvaktvpaqtrlveslqrreitreyeavaighmta
ggtvdepisrhptkrthmavhpmgkpavthyrimehfrvhtrlrlrletgrthqirvhma
hithplvgdpvyggrprppkgaseafistlrkfdrqalhatmlrlyhpisgiemewhapi
pqdmvelievmradfeehkdevdwl
Download sequence
Identical sequences 1v9fA 1v9f_A 2ist_A

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