SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1w3bA from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1w3bA
Domain Number 1 Region: 139-284
Classification Level Classification E-value
Superfamily Protein prenylyltransferase 1.59e-57
Family Protein prenylyltransferase 0.067
Further Details:      
 
Domain Number 2 Region: 10-146
Classification Level Classification E-value
Superfamily Protein prenylyltransferase 9.7e-39
Family SCOPe 0.072
Further Details:      
 
Domain Number 3 Region: 279-386
Classification Level Classification E-value
Superfamily Protein prenylyltransferase 3.51e-38
Family SCOPe 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1w3bA   PDB: 1w3b   SUPERFAMILY: 1w3bA
Sequence length 388
Comment (A:)
Sequence
gpmelahreyqagdfeaaerhcmqlwrqepdntgvllllssihfqcrrldrsahfstlai
kqnpllaeaysnlgnvykergqlqeaiehyrhalrlkpdfidgyinlaaalvaagdmega
vqayvsalqynpdlycvrsdlgnllkalgrleeakacylkaietqpnfavawsnlgcvfn
aqgeiwlaihhfekavtldpnfldayinlgnvlkearifdravaaylralslspnhavvh
gnlacvyyeqglidlaidtyrraielqphfpdaycnlanalkekgsvaeaedcyntalrl
cpthadslnnlanikreqgnieeavrlyrkalevfpefaaahsnlasvlqqqgklqealm
hykeairisptfadaysnmgntlkemqd
Download sequence
Identical sequences 000004560|e1w3bA1|109.4.1.726|A:1-388 000059843|e1w3bB1|109.4.1.726|B:1-388 cath|current|1w3bA00/13-400 cath|current|1w3bB00/13-400 d1w3ba_ d1w3bb_ 1w3bA 1w3b_A 1w3b_B

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