SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 1xj4A from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1xj4A
Domain Number 1 Region: 4-118
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 1.36e-29
Family Heme-binding PAS domain 0.00000135
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) SCOP: 1xj4A   PDB: 1xj4
Sequence length 119
Comment (A:)
Sequence
tipdamividghgiiqlfstaaerlfgwseleaigqnvnilmpepdrsrhdsyisryrtt
sdphiigigrivtgkrrdgttfpmhlsigemqsggepyftgfvrdltehqqtqarlqel
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Identical sequences 1xj4_A 1xj4_B 1xj6_A 1xj6_B 2vv6_A 2vv6_B 2vv6_C 2vv6_D 2vv7_A 2vv7_B 2vv7_C 2vv7_D 2vv8_A 2vv8_B 2vv8_C 2vv8_D cath|current|1xj4A00/154-259 cath|current|1xj4B00/151-257 cath|current|1xj6A00/153-257 cath|current|1xj6B00/151-257 cath|current|2vv6A00/152-257 cath|current|2vv6B00/152-258 cath|current|2vv6C00/154-258 cath|current|2vv6D00/151-258 cath|current|2vv7A00/153-257 cath|current|2vv7B00/151-258 cath|current|2vv7C00/153-258 cath|current|2vv7D00/151-258 cath|current|2vv8A00/152-257 cath|current|2vv8B00/152-258 cath|current|2vv8C00/153-258 cath|current|2vv8D00/151-258 1xj4A

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