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Domain assignment for 2qnhe from PDB chains (SCOP 1.75)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  2qnhe
Domain Number 1 Region: 3-209
Classification Level Classification E-value
Superfamily Alpha-L RNA-binding motif 4.1e-78
Family Ribosomal protein S4 0.00000000474
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) SCOP: 2qnhe   PDB: 2qnh
Sequence length 209
Comment (e:)
Sequence
MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLRE
KQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQL
VRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEG
MKGKFLRLPDREDLALPVNEQLVIEFYSR
Download sequence
Identical sequences A0A1J1EU65 H9ZPM9 P62664 P80373
gi|46199603|ref|YP_005270.1| 1fka_D 1hnw_D 1hnx_D 1hnz_D 1ibk_D 1ibl_D 1ibm_D 1vvj_QD 1vvj_XD 1vy4_AD 1vy4_CD 1vy5_AD 1vy5_CD 1vy6_AD 1vy6_CD 1vy7_AD 1vy7_CD 1xmo_D 1xmq_D 1xnq_D 1xnr_D 2hhh_D 2uu9_D 2uua_D 2uub_D 2uuc_D 2uxb_D 2uxc_D 2uxd_D 2vqe_D 2vqf_D 3oto_D 3t1h_D 3t1y_D 4dr1_D 4dr2_D 4dr3_D 4dr4_D 4dr5_D 4dr6_D 4dr7_D 4duy_D 4duz_D 4dv0_D 4dv1_D 4dv2_D 4dv3_D 4dv4_D 4dv5_D 4dv6_D 4dv7_D 4ji0_D 4ji1_D 4ji2_D 4ji3_D 4ji4_D 4ji5_D 4ji6_D 4ji7_D 4ji8_D 4kvb_D 4l47_QD 4l47_XD 4l71_QD 4l71_XD 4lel_QD 4lel_XD 4lf4_D 4lf5_D 4lf6_D 4lf7_D 4lf8_D 4lf9_D 4lfa_D 4lfb_D 4lfc_D 4lfz_QD 4lfz_XD 4lnt_QD 4lnt_XD 4lsk_QD 4lsk_XD 4lt8_QD 4lt8_XD 4nxm_D 4nxn_D 4p6f_QD 4p6f_XD 4p70_QD 4p70_XD 4tua_QD 4tua_XD 4tub_QD 4tub_XD 4tuc_QD 4tuc_XD 4tud_QD 4tud_XD 4tue_QD 4tue_XD 4v4i_e 4v4j_e 4v4p_BG 4v4r_AD 4v4s_AD 4v4t_AD 4v4x_AG 4v4y_AG 4v4z_AG 4v51_AD 4v51_CD 4v5a_AD 4v5a_CD 4v5c_AD 4v5c_CD 4v5d_AD 4v5d_CD 4v5e_AD 4v5e_CD 4v5f_AD 4v5f_CD 4v5g_AD 4v5g_CD 4v5j_AD 4v5j_CD 4v5k_AD 4v5k_CD 4v5l_AD 4v5m_AD 4v5n_AD 4v5p_AD 4v5p_CD 4v5q_AD 4v5q_CD 4v5r_AD 4v5r_CD 4v5s_AD 4v5s_CD 4v5z_Ad 4v63_AD 4v63_CD 4v67_AD 4v67_CD 4v6a_AD 4v6a_CD 4v6f_BG 4v6f_CG 4v6g_AG 4v6g_CG 4v7j_Ad 4v7j_Bd 4v7k_Ad 4v7k_Bd 4v7l_AD 4v7l_CD 4v7m_AD 4v7m_CD 4v7w_AD 4v7w_CD 4v7x_AD 4v7x_CD 4v7y_AD 4v7y_CD 4v7z_AD 4v7z_CD 4v8a_CD 4v8a_DD 4v8g_AD 4v8g_CD 4v8h_AD 4v8h_CD 4v8i_AD 4v8i_CD 4v8j_AD 4v8j_CD 4v8n_AD 4v8n_CD 4v8o_AD 4v8q_BD 4v8u_AD 4v8u_CD 4v8x_AD 4v8x_CD 4v90_AD 4v95_AD 4v95_CD 4v97_AD 4v97_CD 4v9r_AD 4v9r_CD 4v9s_AD 4v9s_CD 4w2e_d 4w2f_AD 4w2f_CD 4w2g_AD 4w2g_CD 4w2h_AD 4w2h_CD 4w2i_AD 4w2i_CD 4w4g_QD 4w4g_XD 4wpo_BD 4wpo_DD 4wqf_BD 4wqf_DD 4wqr_32 4wqr_3E 4wqu_BD 4wqu_DD 4wqy_BD 4wqy_DD 4wr6_32 4wr6_3E 4wra_32 4wra_3E 4wro_32 4wro_3E 4wsd_32 4wsd_3E 4wsm_32 4wsm_3E 4wt1_32 4wt1_3E 4wu1_32 4wu1_3E 4wzd_32 4wzd_3E 4wzo_32 4wzo_3E 4y4o_1d 4y4o_2d 4y4p_1d 4y4p_2d 4ypb_QD 4ypb_XD 4yy3_D 4yzv_QD 4yzv_XD 4z3s_1d 4z3s_2d 4z8c_1d 4z8c_2d 4zsn_QD 4zsn_XD 5br8_D 5czp_QD 5czp_XD 5d8b_AC 5d8b_EA 5dfe_QD 5dfe_XD 5dox_1d 5dox_2d 5doy_1d 5doy_2d 5e7k_32 5e7k_3E 5e81_32 5e81_3E 5el4_32 5el4_3E 5el5_32 5el5_3E 5el6_32 5el6_3E 5el7_32 5el7_3E 5hau_1d 5hau_2d 5hcp_1d 5hcp_2d 5hcq_1d 5hcq_2d 5hcr_1d 5hcr_2d 5hd1_1d 5hd1_2d 5ib7_32 5ib7_3E 5ib8_32 5ib8_3E 5ibb_32 5ibb_3E 5imq_H 5imr_H 5j30_QD 5j30_XD 5j3c_QD 5j3c_XD 5j4b_1d 5j4b_2d 5j4c_1d 5j4c_2d 5j4d_MA 5j4d_RC 5j8b_d 5lmn_D 5lmo_D 5lmp_D 5lmq_D 5lmr_D 5lms_D 5lmt_D 5lmu_D 5lmv_D 5ndj_32 5ndj_3E 5ndk_32 5ndk_3E 5v8i_1d 5v8i_2d 5vp2_1d 5vp2_2d 5vpo_QD 5vpo_XD 5vpp_QD 5vpp_XD 5w4k_1d 5w4k_2d 5wis_1d 5wis_2d 5wit_1d 5wit_2d 5zlu_J 6b4v_MA 6b4v_QC 6boh_NA 6boh_SC 6bok_LA 6bok_OC 6c5l_AD 6c5l_CD 6cae_1d 6cae_2d 6cfj_1d 6cfj_2d 6cfk_1d 6cfk_2d 6cfl_1d 6cfl_2d 6gsj_32 6gsj_3E 6gsk_32 6gsk_3E 6gsl_32 6gsl_3E gi|55981634|ref|YP_144931.1| gi|386359830|ref|YP_006058075.1| 2ow8e 2qnhe 2uubD WP_011173699.1.25090 WP_011173699.1.52262 WP_011173699.1.85415 YP_144931.1.19876 262724.TTC1301 300852.TTHA1665

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