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Domain assignment for ENSCPOP00000018228 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000018228
Domain Number 1 Region: 71-168
Classification Level Classification E-value
Superfamily Coiled-coil domain of nucleotide exchange factor GrpE 7.32e-18
Family Coiled-coil domain of nucleotide exchange factor GrpE 0.003
Further Details:      
 
Domain Number 2 Region: 169-224
Classification Level Classification E-value
Superfamily Head domain of nucleotide exchange factor GrpE 0.00000000000183
Family Head domain of nucleotide exchange factor GrpE 0.0014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000018228   Gene: ENSCPOG00000023102   Transcript: ENSCPOT00000024812
Sequence length 231
Comment pep:known_by_projection scaffold:cavPor3:scaffold_6:11307589:11316300:1 gene:ENSCPOG00000023102 transcript:ENSCPOT00000024812 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SSQVWNMAARSLWAVRRRLQRLLASSTWSAGRGWLHPFSTATQRTAGEDCSSEDPPDELG
PSLAERALRLKAVKLEKEVQDLTLRYQRAVADCENIRRRTQRCVEDAKIFGIQSFCKDLV
EVADILEKTTECISEEAEAGDQKLTLEKVFRGLSLLEAKLKSVFAKHGLEKMAPIGDKYD
PHEHELICHVPADIGVQPGTVALVRQDGYKLHGRTIRLAQVEVAVESQKRL
Download sequence
Identical sequences ENSCPOP00000018228 10141.ENSCPOP00000018228 ENSCPOP00000018228

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