SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_000979139.1.47110 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_000979139.1.47110
Domain Number 1 Region: 3-250
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 1.55e-42
Family Hypothetical protein VC1974 0.00000835
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_000979139.1.47110
Sequence length 252
Comment 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Salmonella enterica]; AA=GCF_000411875.1; RF=na; TAX=1072572; STAX=28901; NAME=Salmonella enterica subsp. enterica serovar Paratyphi A str. ZJ98-53; strain=ZJ98-53; AL=Contig; RT=Major
Sequence
MMLHAQHMPGQPGAPSLVFLHGFSGDCREWQPVGEQFHGCSRLYIDLPGHGGSAAIPVGG
FADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNERA
RAERRLSDGRWAERFRHEPLTEVFHDWYQQPVFASLTAQQRQALTALRSQNNGETLAAML
EATSLAVQPDLREALNALAFPFYYLCGERDSKFRALAQEVAATCHVIRNAGHNAHRENPA
GVVDSLAQILRL
Download sequence
Identical sequences A0A2J1A702 B5BCN7 Q5PN75
gi|56412794|ref|YP_149869.1| 295319.SPA0555 554290.SSPA0519 gi|197361728|ref|YP_002141364.1| CP000026|CDS_629662-630420 FM200053|CDS_629696-630454 WP_000979139.1.101111 WP_000979139.1.101239 WP_000979139.1.101904 WP_000979139.1.12210 WP_000979139.1.12308 WP_000979139.1.12865 WP_000979139.1.13262 WP_000979139.1.13602 WP_000979139.1.13967 WP_000979139.1.15011 WP_000979139.1.16710 WP_000979139.1.18355 WP_000979139.1.19882 WP_000979139.1.20564 WP_000979139.1.2139 WP_000979139.1.21534 WP_000979139.1.22451 WP_000979139.1.22566 WP_000979139.1.24394 WP_000979139.1.25846 WP_000979139.1.26122 WP_000979139.1.26750 WP_000979139.1.30555 WP_000979139.1.31069 WP_000979139.1.31546 WP_000979139.1.329 WP_000979139.1.33420 WP_000979139.1.33504 WP_000979139.1.34424 WP_000979139.1.35331 WP_000979139.1.35507 WP_000979139.1.36057 WP_000979139.1.36586 WP_000979139.1.36875 WP_000979139.1.38452 WP_000979139.1.38620 WP_000979139.1.39112 WP_000979139.1.39953 WP_000979139.1.40031 WP_000979139.1.40688 WP_000979139.1.42098 WP_000979139.1.4229 WP_000979139.1.42372 WP_000979139.1.44144 WP_000979139.1.44606 WP_000979139.1.44687 WP_000979139.1.4505 WP_000979139.1.47061 WP_000979139.1.47110 WP_000979139.1.47243 WP_000979139.1.47542 WP_000979139.1.47660 WP_000979139.1.48134 WP_000979139.1.48510 WP_000979139.1.48768 WP_000979139.1.48841 WP_000979139.1.49430 WP_000979139.1.49494 WP_000979139.1.49790 WP_000979139.1.50153 WP_000979139.1.50529 WP_000979139.1.50750 WP_000979139.1.5185 WP_000979139.1.52101 WP_000979139.1.54340 WP_000979139.1.5462 WP_000979139.1.55200 WP_000979139.1.56070 WP_000979139.1.56374 WP_000979139.1.56791 WP_000979139.1.56942 WP_000979139.1.57244 WP_000979139.1.5761 WP_000979139.1.58467 WP_000979139.1.59068 WP_000979139.1.59276 WP_000979139.1.60809 WP_000979139.1.61309 WP_000979139.1.6143 WP_000979139.1.61694 WP_000979139.1.62063 WP_000979139.1.62195 WP_000979139.1.64758 WP_000979139.1.65475 WP_000979139.1.65818 WP_000979139.1.65945 WP_000979139.1.67228 WP_000979139.1.67825 WP_000979139.1.69433 WP_000979139.1.69839 WP_000979139.1.7060 WP_000979139.1.71656 WP_000979139.1.71848 WP_000979139.1.72121 WP_000979139.1.72254 WP_000979139.1.72797 WP_000979139.1.72946 WP_000979139.1.73102 WP_000979139.1.73958 WP_000979139.1.74741 WP_000979139.1.75371 WP_000979139.1.76115 WP_000979139.1.7784 WP_000979139.1.78352 WP_000979139.1.78959 WP_000979139.1.79531 WP_000979139.1.79977 WP_000979139.1.80045 WP_000979139.1.81041 WP_000979139.1.81084 WP_000979139.1.81568 WP_000979139.1.81798 WP_000979139.1.82692 WP_000979139.1.83280 WP_000979139.1.83806 WP_000979139.1.84814 WP_000979139.1.84872 WP_000979139.1.84879 WP_000979139.1.86466 WP_000979139.1.87220 WP_000979139.1.87276 WP_000979139.1.87376 WP_000979139.1.87651 WP_000979139.1.87891 WP_000979139.1.88817 WP_000979139.1.89764 WP_000979139.1.91282 WP_000979139.1.91312 WP_000979139.1.91331 WP_000979139.1.9166 WP_000979139.1.91984 WP_000979139.1.92646 WP_000979139.1.92786 WP_000979139.1.92842 WP_000979139.1.92936 WP_000979139.1.93118 WP_000979139.1.94071 WP_000979139.1.95133 WP_000979139.1.9628 WP_000979139.1.96731 WP_000979139.1.99073 WP_000979139.1.99531

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]