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Domain assignment for XP_005056706.1.66865 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005056706.1.66865
Domain Number 1 Region: 7-532
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.69e-90
Family Tandem AAA-ATPase domain 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005056706.1.66865
Sequence length 733
Comment PREDICTED: probable ATP-dependent RNA helicase DHX40 isoform X1 [Ficedula albicollis]; AA=GCF_000247815.1; RF=representative genome; TAX=59894; STAX=59894; NAME=Ficedula albicollis; AL=Chromosome; RT=Major
Sequence
MDAPALPIRRSRRQLVEAVRERPFLIVTGETGSGKSTQLPRYLYEAGLAEHGAIGVTQPR
RVATVSVAQRVAEEMGCALGALVGYQVRFDDCTSEDTAIRYMTDGCLLRQILTDPLLSKY
SVIVLDEAHERSLSTDILFGLLKKLFLQKQPAGRRTEMKVVVMSATLEVEKLSEFFGHCP
VLHIPGRSYPVKEIFCNLLSPRDVGSSAYVTEAVKVTLDVHLNEPEGDILVFLTGQNEIE
RACDLLFKKAESIDYRYEVHDRAVEGLLILPLYGSMSTDQQKRIFLPAPRGIRKCVVSTN
IAATSLTIEGVRYVVDSGFVKQLNHNPRVSLDILEVVPISKSEAKQRAGRAGRTSAGKSF
GLYSREFWEQCMPEHTLPEIRRSSLTSVILTLKCLSVHDVIRFPYLDPPEERHILEALKE
LYQCNAIDRRGHVTRLGEFLVQFPLPPKLSCAVIKAASLGCEDLLLPIAAMLSVENVFIR
PGDPQKQKEAELQHQELASQVGGCNDFATLLNIFEQCKASESPSAWCKEYWIHWRAVKSA
FSVERQLREITTKLKQLPDFPKETFEGSRTEILRRCLCAGYFINVARRSAARTFCTMDGH
GSIVYIHPSSTLYNQETLLEWIIFHEVAVTSKIYVRTVCPVRYEWLRELLPRLHQLDAHE
LSSVAREEVTEEEITRWEQREELKRQCEGVTDSSARKMERRNDEQSIQDARARYLERKQQ
RAQGLSGPEKEMG
Download sequence
Identical sequences U3JSR4
ENSFALP00000005818 XP_005056706.1.66865

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