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Domain assignment for 1ixc_B from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1ixc_B
Domain Number 1 Region: 90-292
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 1.57e-26
Family Phosphate binding protein-like 0.00000000598
Further Details:      
 
Domain Number 2 Region: 1-78
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.94e-23
Family LysR-like transcriptional regulators 0.0000213
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 1ixc_B
Sequence length 294
Comment mol:protein length:294 LysR-type regulatory protein
Sequence
MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAA
GHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTA
TVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVHRSQSGKFGKT
CKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASS
IVPASVAAIRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSAKD
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Identical sequences A0A1U9V3L6 E0R7P1 E3HXP7 G9FBH1 Q8GFI1 Q9WXC7
gi|311109714|ref|YP_003982566.1| 1ixcA gi|311109714|ref|YP_003982566.1|NC_014641 gi|410688650|ref|YP_006961884.1|NC_019283 gi|58616647|ref|YP_195856.1|NC_006830 WP_011255153.1.21294 WP_011255153.1.77482 WP_011255153.1.79376 1ixc_A 1ixc_B 1iz1_A 1iz1_B 1iz1_P 1iz1_Q

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