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Domain assignment for 1qn3_B from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  1qn3_B
Domain Number 1 Region: 109-193
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 1.69e-52
Family SCOPe 0.017
Further Details:      
 
Domain Number 2 Region: 24-103
Classification Level Classification E-value
Superfamily TATA-box binding protein-like 6.76e-52
Family TATA-box binding protein (TBP), C-terminal domain 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 1qn3_B
Sequence length 200
Comment mol:protein length:200 TRANSCRIPTION INITIATION FACTOR TFIID-1
Sequence
MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDE
TYKAFENIYPVLSEFRKIQQ
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Identical sequences P28147
AT3G13445.1 NP_187953.1.80155 1qnaA 1qn3_A 1qn3_B 1qn4_A 1qn4_B 1qn5_A 1qn5_B 1qn6_A 1qn6_B 1qn7_A 1qn7_B 1qn8_A 1qn8_B 1qn9_A 1qn9_B 1qna_A 1qna_B 1qnb_A 1qnb_B 1qnc_A 1qnc_B 1qne_A 1qne_B 1vok_A 1vok_B 1vol_B AT3G13445.1 3702.AT3G13445.1-P

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