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Domain assignment for 3j7a_D from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  3j7a_D
Domain Number 1 Region: 94-192
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 8.78e-27
Family Ribosomal protein S3 C-terminal domain 0.0017
Further Details:      
 
Domain Number 2 Region: 10-100
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 2.01e-21
Family Prokaryotic type KH domain (KH-domain type II) 0.0000447
Further Details:      
 
Domain Number 3 Region: 169-217
Classification Level Classification E-value
Superfamily CATH 0.000000000664
Family CATH 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 3j7a_D
Sequence length 221
Comment mol:protein length:221 40S ribosomal protein uS3
Sequence
MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG
DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC
YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ
GVLGIKVKIMLPTAIDTRTGLTSILPDNISVLEPKTDTVDL
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Identical sequences A0A024V036 A0A024VY66 A0A024WIR9 A0A024WZG4 A0A060S629 A0A0L7K5V4 A0A151LBI5 A0A2I0C223 Q8IKH8 W4I861 W4IWY3 W7F377 W7FQQ3
PFHG_00006T0 5833.PF14_0627-1 3j7a_D PF14_0627 gi|124810210|ref|XP_001348801.1| gi|23497701|gb|AAN37240.1| XP_001348801.1.26446 XP_018639713.1.24268

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