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Domain assignment for 4dv3_C from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  4dv3_C
Domain Number 1 Region: 2-106
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 5.71e-37
Family Prokaryotic type KH domain (KH-domain type II) 0.000000996
Further Details:      
 
Domain Number 2 Region: 107-206
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 1.83e-35
Family Ribosomal protein S3 C-terminal domain 0.00000169
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 4dv3_C
Sequence length 239
Comment mol:protein length:239 ribosomal protein S3
Sequence
MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERA
ADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRV
AEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRA
NIDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKARPELPKAEERPRRRRPAVRVKKEE
Download sequence
Identical sequences F6DEP6 H7GHV1 H9ZPK8 P62663 P80372
262724.TTC1322 300852.TTHA1686 2ow8d 2uubC gi|384431866|ref|YP_005641226.1| WP_008633418.1.25090 WP_008633418.1.52262 WP_008633418.1.65589 WP_008633418.1.85415 WP_008633418.1.96068 YP_144952.1.19876 gi|386359809|ref|YP_006058054.1| gi|46199624|ref|YP_005291.1| 1fjg_C 1hnw_C 1hnx_C 1hnz_C 1hr0_C 1ibk_C 1ibl_C 1ibm_C 1j5e_C 1jgo_F 1jgp_F 1jgq_F 1ml5_F 1n32_C 1n33_C 1n34_C 1n36_C 1vvj_QC 1vvj_XC 1vy4_AC 1vy4_CC 1vy5_AC 1vy5_CC 1vy6_AC 1vy6_CC 1vy7_AC 1vy7_CC 1xmo_C 1xmq_C 1xnq_C 1xnr_C 2f4v_C 2hhh_C 2uu9_C 2uua_C 2uub_C 2uuc_C 2uxb_C 2uxc_C 2uxd_C 2vqe_C 2vqf_C 3oto_C 3t1h_C 3t1y_C 4aqy_C 4b3m_C 4b3r_C 4b3s_C 4b3t_C 4dr1_C 4dr2_C 4dr3_C 4dr4_C 4dr5_C 4dr6_C 4dr7_C 4duy_C 4duz_C 4dv0_C 4dv1_C 4dv2_C 4dv3_C 4dv4_C 4dv5_C 4dv6_C 4dv7_C 4ji0_C 4ji1_C 4ji2_C 4ji3_C 4ji4_C 4ji5_C 4ji6_C 4ji7_C 4ji8_C 4kvb_C 4l47_QC 4l47_XC 4l71_QC 4l71_XC 4lel_QC 4lel_XC 4lf4_C 4lf5_C 4lf6_C 4lf7_C 4lf8_C 4lf9_C 4lfa_C 4lfb_C 4lfc_C 4lfz_QC 4lfz_XC 4lnt_QC 4lnt_XC 4lsk_QC 4lsk_XC 4lt8_QC 4lt8_XC 4nxm_C 4nxn_C 4ox9_C 4p6f_QC 4p6f_XC 4p70_QC 4p70_XC 4tua_QC 4tua_XC 4tub_QC 4tub_XC 4tuc_QC 4tuc_XC 4tud_QC 4tud_XC 4tue_QC 4tue_XC 4v42_AF 4v4i_d 4v4j_d 4v4p_BF 4v4r_AC 4v4s_AC 4v4t_AC 4v4x_AF 4v4y_AF 4v4z_AF 4v51_AC 4v51_CC 4v5a_AC 4v5a_CC 4v5c_AC 4v5c_CC 4v5d_AC 4v5d_CC 4v5e_AC 4v5e_CC 4v5f_AC 4v5f_CC 4v5g_AC 4v5g_CC 4v5j_AC 4v5j_CC 4v5k_AC 4v5k_CC 4v5l_AC 4v5m_AC 4v5n_AC 4v5p_AC 4v5p_CC 4v5q_AC 4v5q_CC 4v5r_AC 4v5r_CC 4v5s_AC 4v5s_CC 4v63_AC 4v63_CC 4v67_AC 4v67_CC 4v6a_AC 4v6a_CC 4v6f_BF 4v6f_CF 4v6g_AF 4v6g_CF 4v7j_Ac 4v7j_Bc 4v7k_Ac 4v7k_Bc 4v7l_AC 4v7l_CC 4v7m_AC 4v7m_CC 4v7w_AC 4v7w_CC 4v7x_AC 4v7x_CC 4v7y_AC 4v7y_CC 4v7z_AC 4v7z_CC 4v87_BF 4v87_CF 4v8a_CC 4v8a_DC 4v8b_AF 4v8b_CF 4v8c_CF 4v8c_DF 4v8d_AF 4v8d_CF 4v8e_BF 4v8e_DF 4v8f_BF 4v8f_CF 4v8g_AC 4v8g_CC 4v8h_AC 4v8h_CC 4v8i_AC 4v8i_CC 4v8j_AC 4v8j_CC 4v8n_AC 4v8n_CC 4v8o_AC 4v8q_BC 4v8u_AC 4v8u_CC 4v8x_AC 4v8x_CC 4v90_AC 4v95_AC 4v95_CC 4v97_AC 4v97_CC 4v9a_AF 4v9a_CF 4v9b_AF 4v9b_CF 4v9r_AC 4v9r_CC 4v9s_AC 4v9s_CC 4w2e_c 4w2f_AC 4w2f_CC 4w2g_AC 4w2g_CC 4w2h_AC 4w2h_CC 4w2i_AC 4w2i_CC 4w4g_QC 4w4g_XC 4wpo_BC 4wpo_DC 4wq1_22 4wq1_2E 4wqf_BC 4wqf_DC 4wqr_22 4wqr_2E 4wqu_BC 4wqu_DC 4wqy_BC 4wqy_DC 4wr6_22 4wr6_2E 4wra_22 4wra_2E 4wro_22 4wro_2E 4wsd_22 4wsd_2E 4wsm_22 4wsm_2E 4wt1_22 4wt1_2E 4wu1_22 4wu1_2E 4wzd_22 4wzd_2E 4wzo_22 4wzo_2E 4y4o_1c 4y4o_2c 4y4p_1c 4y4p_2c 4ypb_QC 4ypb_XC 4yy3_C 4yzv_QC 4yzv_XC 4z3s_1c 4z3s_2c 4z8c_1c 4z8c_2c 4zsn_QC 4zsn_XC 5br8_C 5czp_QC 5czp_XC 5d8b_DA 5d8b_ZB 5dfe_QC 5dfe_XC 5dox_1c 5dox_2c 5doy_1c 5doy_2c 5e7k_22 5e7k_2E 5e81_22 5e81_2E 5el4_22 5el4_2E 5el5_22 5el5_2E 5el6_22 5el6_2E 5el7_22 5el7_2E 5hau_1c 5hau_2c 5hcp_1c 5hcp_2c 5hcq_1c 5hcq_2c 5hcr_1c 5hcr_2c 5hd1_1c 5hd1_2c 5ib7_22 5ib7_2E 5ib8_22 5ib8_2E 5ibb_22 5ibb_2E 5imq_G 5imr_G 5j30_QC 5j30_XC 5j3c_QC 5j3c_XC 5j4b_1c 5j4b_2c 5j4c_1c 5j4c_2c 5j4d_LA 5j4d_QC 5j8b_c 5lmn_C 5lmo_C 5lmp_C 5lmq_C 5lmr_C 5lms_C 5lmt_C 5lmu_C 5lmv_C 5ndj_22 5ndj_2E 5ndk_22 5ndk_2E 5v8i_1c 5v8i_2c 5vp2_1c 5vp2_2c 5vpo_QC 5vpo_XC 5vpp_QC 5vpp_XC 5w4k_1c 5w4k_2c 5wis_1c 5wis_2c 5wit_1c 5wit_2c 5zlu_I 6b4v_LA 6b4v_PC 6boh_MA 6boh_RC 6bok_KA 6bok_NC 6c5l_AC 6c5l_CC 6cae_1c 6cae_2c 6cfj_1c 6cfj_2c 6cfk_1c 6cfk_2c 6cfl_1c 6cfl_2c 6gsj_22 6gsj_2E 6gsk_22 6gsk_2E 6gsl_22 6gsl_2E gi|55981655|ref|YP_144952.1|

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