SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 4v4n_BC from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  4v4n_BC
Domain Number 1 Region: 86-185
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 1.24e-25
Family Ribosomal protein S3 C-terminal domain 0.00081
Further Details:      
 
Domain Number 2 Region: 7-93
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 1.46e-25
Family Prokaryotic type KH domain (KH-domain type II) 0.00062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 4v4n_BC
Sequence length 186
Comment mol:protein length:186 30S ribosomal protein S3P
Sequence
maieryfireavremlideflekelrragyggldikktplgtkviifaanpgyvigrggr
rireltrilekqfglenpqieveeiknpylnakvqavrlaqalergihfrraayaalrai
mnngargveirlsgkltgeraksirfyqgylakvgnpaetlvskgyaqallklgvigvkv
aimppg
Download sequence
Identical sequences 4v4n_BC

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]