SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 4v76_AC from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  4v76_AC
Domain Number 1 Region: 108-206
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 5.27e-41
Family Ribosomal protein S3 C-terminal domain 0.00000151
Further Details:      
 
Domain Number 2 Region: 2-106
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 1.22e-37
Family Prokaryotic type KH domain (KH-domain type II) 0.00000103
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 4v76_AC
Sequence length 208
Comment mol:protein length:208 30S ribosomal protein S3
Sequence
MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP
AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI
TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA
DIDYNTSEAHTTYGVIGVKVWIFKGEIX
Download sequence
Identical sequences 4v6y_AC 4v6z_AC 4v70_AC 4v71_AC 4v72_AC 4v73_AC 4v74_AC 4v75_AC 4v76_AC 4v77_AC 4v78_AC 4v79_AC 4v7a_AC

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]