SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 4v92_BD from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  4v92_BD
Domain Number 1 Region: 92-217
Classification Level Classification E-value
Superfamily CATH 2.03e-50
Family CATH 0.000000682
Further Details:      
 
Domain Number 2 Region: 90-188
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 8.78e-27
Family Ribosomal protein S3 C-terminal domain 0.0016
Further Details:      
 
Domain Number 3 Region: 10-96
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 4.64e-22
Family Prokaryotic type KH domain (KH-domain type II) 0.0000389
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 4v92_BD
Sequence length 222
Comment mol:protein length:222 US3
Sequence
liskkrklvadgvfyaelnefftrelaeegysgvevrvtptkteviiratrtqdvlgeng
rrineltllvqkrfkyapgtivlyaervqdrglsavaqaesmkfkllnglairraaygvv
ryvmesgakgcevvvsgklraarakamkfadgflihsgqpvndfidtatrhvlmrqgvlg
ikvkimrdpaksrtgpkalpdavtiiepkeeepilapsvkdy
Download sequence
Identical sequences 4v92_BD

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]