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Domain assignment for 5dat_S3 from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  5dat_S3
Domain Number 1 Region: 94-219
Classification Level Classification E-value
Superfamily CATH 2.4e-50
Family CATH 0.000000682
Further Details:      
 
Domain Number 2 Region: 92-190
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 1.02e-26
Family Ribosomal protein S3 C-terminal domain 0.0016
Further Details:      
 
Domain Number 3 Region: 12-98
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 5.37e-22
Family Prokaryotic type KH domain (KH-domain type II) 0.0000389
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 5dat_S3
Sequence length 239
Comment mol:protein length:239 40S ribosomal protein S3
Sequence
VALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGE
NGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYG
VVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGV
LGIKVKIMRDPAKSRTGPKALPDAVTIIEPKEEEPILAPSVKDYRPAEETEAQAEPVEA
Download sequence
Identical sequences 4u3m_S3 4u3m_s3 4u3n_S3 4u3n_s3 4u3u_S3 4u3u_s3 4u4n_S3 4u4n_s3 4u4o_S3 4u4o_s3 4u4q_S3 4u4q_s3 4u4r_S3 4u4r_s3 4u4u_S3 4u4u_s3 4u4y_S3 4u4y_s3 4u4z_S3 4u4z_s3 4u50_S3 4u50_s3 4u51_S3 4u51_s3 4u52_S3 4u52_s3 4u53_S3 4u53_s3 4u55_S3 4u55_s3 4u56_S3 4u56_s3 4u6f_S3 4u6f_s3 5dat_S3 5dat_s3 5dc3_S3 5dc3_s3 5dge_S3 5dge_s3 5dgf_S3 5dgf_s3 5dgv_S3 5dgv_s3 5fci_S3 5fci_s3 5fcj_S3 5fcj_s3

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