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Domain assignment for 5lyb_S3 from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  5lyb_S3
Domain Number 1 Region: 93-218
Classification Level Classification E-value
Superfamily CATH 2.03e-50
Family CATH 0.000000682
Further Details:      
 
Domain Number 2 Region: 91-189
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 8.78e-27
Family Ribosomal protein S3 C-terminal domain 0.0016
Further Details:      
 
Domain Number 3 Region: 11-97
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 4.64e-22
Family Prokaryotic type KH domain (KH-domain type II) 0.0000389
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 5lyb_S3
Sequence length 223
Comment mol:protein length:223 40S ribosomal protein S3
Sequence
ALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGEN
GRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGV
VRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVL
GIKVKIMRDPAKSRTGPKALPDAVTIIEPKEEEPILAPSVKDY
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Identical sequences A0A0J9X205
4uer_C 5i4l_S3 5i4l_s3 5lyb_S3 5lyb_s3 5m1j_D2 5mei_E 5mei_s3 5ndg_S3 5ndg_s3 5ndv_S3 5ndv_s3 5ndw_S3 5ndw_s3 5obm_S3 5obm_s3 5on6_E 5on6_s3 5tbw_E 5tbw_s3 5tga_S3 5tga_s3 5tgm_S3 5tgm_s3 6gq1_t 6gqb_t 6gqv_t

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