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Domain assignment for 5oa3_D from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  5oa3_D
Domain Number 1 Region: 95-222
Classification Level Classification E-value
Superfamily CATH 2.95e-59
Family CATH 0.00000478
Further Details:      
 
Domain Number 2 Region: 94-192
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 2.49e-28
Family Ribosomal protein S3 C-terminal domain 0.0017
Further Details:      
 
Domain Number 3 Region: 10-99
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 4.94e-26
Family Prokaryotic type KH domain (KH-domain type II) 0.00000792
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 5oa3_D
Sequence length 243
Comment mol:protein length:243 40S ribosomal protein S3
Sequence
MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG
EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY
GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG
VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQPV
PTA
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Identical sequences A0A0D9QV93 A0A1U7T1Z5 A0A2I3RE57 A0A2K5DG13 A0A2K5J8P1 A0A2K5MEJ1 A0A2K5PZ61 A0A2K5X8F6 A0A2K5XTQ4 A0A2K6BX85 A0A2K6H0H9 A0A2K6N638 A0A2K6NDX7 A0A2K6SRK1 F7A782 G3QUH7 H2NEP2 L8I4B2 P23396 Q0Z8U2 Q3T169 S9XG44
ENSPPYP00000004215 gi|15718687|ref|NP_000996.2| ENSP00000433821 ENSP00000434643 ENSP00000436971 ENSTTRP00000005538 ENSMMUP00000011816 ENSVPAP00000010808 ENSBTAP00000003962 ENSPANP00000000733 ENSP00000433821 ENSP00000434643 ENSP00000436971 ENSMMUP00000011816 ENSMMUP00000036826 NP_000996.2.87134 NP_000996.2.92137 NP_001029219.1.59421 NP_001029219.1.76553 NP_001038066.1.46622 NP_001238928.1.37143 NP_001243731.1.87134 NP_001243731.1.92137 NP_001253219.1.72884 XP_003780943.1.62490 XP_003814749.1.60992 XP_003923526.1.74449 XP_003923528.1.74449 XP_004016377.1.66739 XP_004279849.1.21590 XP_004312985.1.83887 XP_005579158.1.63531 XP_005690043.1.57651 XP_005903290.1.15283 XP_006074139.1.26621 XP_006173358.1.101512 XP_006203389.1.17985 XP_007101505.1.24612 XP_007101506.1.24612 XP_007455088.1.90284 XP_007455089.1.90284 XP_008018361.1.81039 XP_008050383.1.4292 XP_010365097.1.97406 XP_010828810.1.44457 XP_010845869.1.44457 XP_010971448.1.22495 XP_010987964.1.51371 XP_011717398.1.29376 XP_011797406.1.43180 XP_011797407.1.43180 XP_011797408.1.43180 XP_011797409.1.43180 XP_011857421.1.47321 XP_011857422.1.47321 XP_011900198.1.92194 XP_012006418.1.54773 XP_012501070.1.63892 XP_012600359.2.48125 XP_017388497.1.71028 XP_017740712.1.44346 XP_018891660.1.27298 XP_019831012.1.53367 XP_020769270.1.74333 XP_020957926.1.46622 XP_020957927.1.46622 XP_020957928.1.46622 XP_021527483.1.9421 ENSPPYP00000004215 ENSVPAP00000010808 3j7p_SD 3j7r_SD 4d5l_D 4d61_D 4ug0_SD 4ujc_CD 4ujd_CD 4uje_BD 4v5z_Ac 4v6x_AD 5a2q_D 5aj0_BD 5flx_D 5lks_SD 5oa3_D 5t2c_Aq 5vyc_D1 5vyc_D2 5vyc_D3 5vyc_D4 5vyc_D5 5vyc_D6 6ek0_SD 6g51_D 6g53_D 6g5h_D 6g5i_D ENSTTRP00000005538 2zkqc 9544.ENSMMUP00000036826 9600.ENSPPYP00000004215 9606.ENSP00000278572 ENSBTAP00000003962

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