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Domain assignment for 6d90_EE from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  6d90_EE
Domain Number 1 Region: 133-260
Classification Level Classification E-value
Superfamily CATH 4.24e-59
Family CATH 0.00000478
Further Details:      
 
Domain Number 2 Region: 132-230
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 3.44e-28
Family Ribosomal protein S3 C-terminal domain 0.0017
Further Details:      
 
Domain Number 3 Region: 48-137
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 6.59e-26
Family Prokaryotic type KH domain (KH-domain type II) 0.00000792
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 6d90_EE
Sequence length 281
Comment mol:protein length:281 uS3
Sequence
MSARRRRRRAAFRRRAEPFIPISVREPLPFLSAARGGKMAVQISKKRKFVADGIFKAELN
EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG
SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL
RGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKK
PLPDHVSIVEPKDEILPTTPISEQKGGKPEPPAMPQPVPTA
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Identical sequences G1TNM3
ENSOCUP00000018598 6d90_EE 6d9j_EE

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