SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 6dzi_k from Protein Data Bank

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  6dzi_k
Domain Number 1 Region: 105-205
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 1.98e-36
Family Ribosomal protein S3 C-terminal domain 0.0000179
Further Details:      
 
Domain Number 2 Region: 1-104
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 3.95e-36
Family Prokaryotic type KH domain (KH-domain type II) 0.0000447
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 6dzi_k
Sequence length 208
Comment mol:protein length:208 30S ribosomal protein S3
Sequence
GQKINPHGFRLGITTEWKSRWYADKQYKDYVKEDVAIRKLLATGLERAGIADVEIERTRD
RVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGVAE
QLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRAD
IDYGLYEAKTTFGRIGVKVWIYKGDIVG
Download sequence
Identical sequences 6dzi_k

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]