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Domain assignment for 6dzk_C from Protein Data Bank

Domain architecture


Domain assignment details

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Strong hits

Sequence:  6dzk_C
Domain Number 1 Region: 106-206
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 3.88e-36
Family Ribosomal protein S3 C-terminal domain 0.0000179
Further Details:      
 
Domain Number 2 Region: 2-105
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 7.61e-36
Family Prokaryotic type KH domain (KH-domain type II) 0.0000447
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 6dzk_C
Sequence length 275
Comment mol:protein length:275 30S ribosomal protein S3
Sequence
MGQKINPHGFRLGITTEWKSRWYADKQYKDYVKEDVAIRKLLATGLERAGIADVEIERTR
DRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGVA
EQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA
DIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAAAPASDRPRRERPSGTRPRRSGSA
GTTATSTEAGRAATSDAPAAGTAAAAEAPAESTES
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Identical sequences A0A0D6HA36 A0QSD7 L8FH85
gi|118473160|ref|YP_885825.1| 5o5j_C 5o61_BC 5xyu_C 5zeb_c 5zep_c 5zeu_c 6dzk_C 246196.MSMEG_1442 gi|118473160|ref|YP_885825.1| WP_003892829.1.100356 WP_003892829.1.19768 WP_003892829.1.23286 WP_003892829.1.56412 WP_003892829.1.74845 WP_003892829.1.94974 WP_003892829.1.96786 YP_885825.1.77314

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