SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|113473770|ref|YP_718033.1|NC_008308 from NCBI plasmid sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|113473770|ref|YP_718033.1|NC_008308
Domain Number 1 Region: 9-274
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 2.39e-54
Family Biotin biosynthesis protein BioH 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|113473770|ref|YP_718033.1|NC_008308
Sequence length 279
Comment hydrolase, alpha/beta fold family [Sphingomonas sp. KA1 plasmid pCAR3]
Sequence
MERSRYVEPDPEIIEVGKRKVTIRQAGAGPGLPLVLLHGIGSNSSAWAGQFAELASERRV
VAWNAPGYVGSTPLPMAAPTAADYGAALHGLLDVLAIERALLVGQSLGAIMATAAALQGP
DRFAGLVLASPASGYAVRPDDVLPPRVAERIAEVERFGPLGLADRRAHRLVTENAAPEAR
ALIHRVMSEVTIEGYTQASRMLAHADLGEMVSRLAVPTLVLWGESDVITPPAGCAAIAAA
APRAASRAFPDLGHGFATEAPALFNQALTTFLAQIERQG
Download sequence
Identical sequences Q0KJM1
gi|113473770|ref|YP_718033.1|NC_008308

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]