SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|339328157|ref|YP_004687849.1|NC_015727 from NCBI plasmid sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|339328157|ref|YP_004687849.1|NC_015727
Domain Number 1 Region: 290-443
Classification Level Classification E-value
Superfamily FMN-binding split barrel 9.57e-50
Family NADH:FMN oxidoreductase-like 0.00013
Further Details:      
 
Domain Number 2 Region: 10-276
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 2.73e-36
Family Carbon-carbon bond hydrolase 0.053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|339328157|ref|YP_004687849.1|NC_015727
Sequence length 452
Comment flavin-dependent monooxygenase reductase subunit [Cupriavidus necator N-1 plasmid pBB1]
Sequence
MTMRLNGSGEITLAASASGAPEDPCVLLLPGFGQTAAAWARASKALVAAGRYVVTVELRG
HGESDWSPNRRYELGDIIQDIVAVIQQLPSKPAVVGANLGGLAALAAISESPEPLASALV
LIDAAPRMAPAGLDRMASLMTMDADGFSTVADAGRVVAEHLPAKQQLDLEEVKRHLRRCD
DGRFRWHIDPAYQGFKVDASDRKAAQRRFTAAALALDIPTFFVRGESSTKVDRESMHEFR
ELVPHAEFADIPGMGDAIIGGRNDAFDAAIIGFLERAIPRSKLRPQGGVEPRMLRDAMGC
FATGVTVITTSDPDGTPMGFTANSFTSVSLDPPLVLFCVKRESASVEALRKRGAFAVNVL
HIGQQAISGKFASRIEDRFAATEWELWEYQVPIILDAIANFECSIREIVDGGDHVIVLGL
VKRVHYDPVRDPLLFFQGKYRRIHVAREESEK
Download sequence
Identical sequences F8GWU1
WP_013958866.1.32076 gi|339328157|ref|YP_004687849.1|NC_015727 gi|339328157|ref|YP_004687849.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]