SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|91790888|ref|YP_551839.1|NC_007949 from NCBI plasmid sequences

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|91790888|ref|YP_551839.1|NC_007949
Domain Number 1 Region: 3-107,177-219
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 0.00000000232
Family Hypothetical protein VC1974 0.08
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|91790888|ref|YP_551839.1|NC_007949
Sequence length 373
Comment hypothetical protein Bpro_5069 [Polaromonas sp. JS666 plasmid 1]
Sequence
MSTCLVIHGTWGDRSDFAFADSLFCRAIKAATKHTLEFERFEWSGKNSSIERVQAALRLR
EVIYAFPDSRLPILLLAHSHGGNVAIEALRDEDVAMRVAGVVTMGTPFLSETIRHWVLFL
STMPGRMSVYAAVVGIVLASVFAIVGSIISMHHPAYGMAGALALLVLFFVSSRSPHSDLL
EGAAKAVRLRSETILAKKSSPINAKLLVVHARADEALWWLRHVFAFSSIPFTLFSVGLVT
TGWAMLLAIALGALFRVLRIFMDEKSIEWMLVPVFASAGFGLSALLLGLVAILLTKSLQR
FIGAGEAVSFWSDIVTHVQATRLPKIAVTDIRKLDASLGKFHGGLSHSKYMRSGDVADQI
AEAFDGWLSNSAA
Download sequence
Identical sequences Q120V1
gi|91790888|ref|YP_551839.1|NC_007949 gi|91790888|ref|YP_551839.1| 296591.Bpro_5069 WP_011485924.1.11221

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]