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Domain assignment for gi|71408264|ref|XP_806547.1| from Protozoadb 2010_08

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|71408264|ref|XP_806547.1|
Domain Number 1 Region: 94-190
Classification Level Classification E-value
Superfamily Ribosomal protein S3 C-terminal domain 4.17e-25
Family Ribosomal protein S3 C-terminal domain 0.0015
Further Details:      
 
Domain Number 2 Region: 13-98
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 1.04e-19
Family Prokaryotic type KH domain (KH-domain type II) 0.0000625
Further Details:      
 
Domain Number 3 Region: 166-211
Classification Level Classification E-value
Superfamily CATH 0.0000000000443
Family CATH 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|71408264|ref|XP_806547.1|
Sequence length 214
Comment 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
Sequence
MGPLSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGE
KGRRIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMG
IIRHVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGT
LGVKVKIMLPKSMQNEEEILPDVITVLEPKEITA
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Identical sequences Q4DMK9
psu|Tc00.1047053507677.39 5opt_m XP_806547.1.87722 XP_815622.1.87722 XP_816670.1.87722 gi|71408264|ref|XP_806547.1| gi|71653987|ref|XP_815622.1| gi|71656239|ref|XP_816670.1|

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