SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|18978078|ref|NP_579435.1| from Pyrococcus furiosus DSM 3638

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|18978078|ref|NP_579435.1|
Domain Number 1 Region: 3-379
Classification Level Classification E-value
Superfamily Tryptophan synthase beta subunit-like PLP-dependent enzymes 1.74e-219
Family Tryptophan synthase beta subunit-like PLP-dependent enzymes 0.000000359
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|18978078|ref|NP_579435.1|
Sequence length 388
Comment tryptophan synthase subunit beta [Pyrococcus furiosus DSM 3638]
Sequence
MWFGEFGGQYVPETLIEPLKELEKAYKRFKDDEEFNRQLNYYLKTWAGRPTPLYYAKRLT
EKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGKTRLIAETGAGQHGVATAMAGAL
LGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTH
YLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV
NDKKVKLVGVEAGGKGLESGKHSASLNAGQVGVFHGMLSYFLQDEEGQIKPTHSIAPGLD
YPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALESAHAVAYAMKLAKEM
SRDEIIIVNLSGRGDKDLDIVLKVSGNV
Download sequence
Identical sequences I6TZG2 Q8U093
1v8zA gi|18978078|ref|NP_579435.1| WP_011012852.1.13913 WP_011012852.1.59273 1v8z_A 1v8z_B 1v8z_C 1v8z_D 001712649|e5dw0A1|2003.4.1.5|A:1-388 d5dw0a_ d5ixjb1 d5ixjd1 d5t6mc1 gi|397652645|ref|YP_006493226.1| 186497.PF1706 Pfu-1584456-001 my_001000047.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]