SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A242XTJ4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A242XTJ4
Domain Number 1 Region: 317-468
Classification Level Classification E-value
Superfamily HD-domain/PDEase-like 1.59e-30
Family HD domain 0.01
Further Details:      
 
Domain Number 2 Region: 209-305
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 3.42e-16
Family Eukaryotic type KH-domain (KH-domain type I) 0.0026
Further Details:      
 
Weak hits

Sequence:  A0A242XTJ4
Domain Number - Region: 91-138
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0196
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A242XTJ4
Sequence length 521
Comment (tr|A0A242XTJ4|A0A242XTJ4_BACTU) Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335, ECO:0000256|SAAS:SAAS00548727} KW=Complete proteome OX=257986 OS=Bacillus thuringiensis serovar novosibirsk. GN=BK719_34010 OC=Bacillus cereus group.
Sequence
MSSTVWILISILLATTVGAVVGFFVRKSIAEAKINGAANEAKRILDEANREAEALKKEAL
LEAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDKREQQLEKKEESL
VARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVENEVSHEIAVMVKESE
VRAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYI
REVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEK
LARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVL
VAAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTI
DDLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
Download sequence
Identical sequences A0A023PB37 A0A0J7JKS0 A0A0K0SBX7 A0A0Q0R904 A0A0Q9G3A2 A0A0Q9HB12 A0A135WVN6 A0A160LD36 A0A242XTJ4 A0A242ZG10 A0A243BEZ7 A0A243IVI6 A0A243MA17 A0A2H3Q9D5 B7ITN0 C2N4S1 C2P2C3 C3DNH8 G9Q3A7 J7HT33 J7WRY3 J7Z020 J8G7Q3 R8CFL5 R8ITP4 R8RRF9 R8YMJ8 W8YF19
gi|218898878|ref|YP_002447289.1| WP_000099770.1.100497 WP_000099770.1.101838 WP_000099770.1.12935 WP_000099770.1.13269 WP_000099770.1.22084 WP_000099770.1.26459 WP_000099770.1.26483 WP_000099770.1.26965 WP_000099770.1.27446 WP_000099770.1.27931 WP_000099770.1.28599 WP_000099770.1.3180 WP_000099770.1.34537 WP_000099770.1.3546 WP_000099770.1.35694 WP_000099770.1.35769 WP_000099770.1.36279 WP_000099770.1.38325 WP_000099770.1.42485 WP_000099770.1.43442 WP_000099770.1.4355 WP_000099770.1.44348 WP_000099770.1.44428 WP_000099770.1.45720 WP_000099770.1.47975 WP_000099770.1.48759 WP_000099770.1.50042 WP_000099770.1.51681 WP_000099770.1.52284 WP_000099770.1.54142 WP_000099770.1.58712 WP_000099770.1.59384 WP_000099770.1.60526 WP_000099770.1.61243 WP_000099770.1.61799 WP_000099770.1.6241 WP_000099770.1.62770 WP_000099770.1.64421 WP_000099770.1.6816 WP_000099770.1.70667 WP_000099770.1.71242 WP_000099770.1.72484 WP_000099770.1.73638 WP_000099770.1.74863 WP_000099770.1.75866 WP_000099770.1.77567 WP_000099770.1.83666 WP_000099770.1.85348 WP_000099770.1.869 WP_000099770.1.87649 WP_000099770.1.87705 WP_000099770.1.89145 WP_000099770.1.90466 WP_000099770.1.92555 WP_000099770.1.94308 WP_000099770.1.9703 WP_000099770.1.97082 WP_000099770.1.97821 WP_000099770.1.97830 WP_000099770.1.98315 WP_000099770.1.99636 gi|402558894|ref|YP_006601618.1| gi|434376836|ref|YP_006611480.1| 405531.BCG9842_B1422

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]