SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for B0TU73 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  B0TU73
Domain Number - Region: 43-89
Classification Level Classification E-value
Superfamily Soluble domain of poliovirus core protein 3a 0.0432
Family Soluble domain of poliovirus core protein 3a 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) B0TU73
Sequence length 287
Comment (sp|B0TU73|PSD_SHEHH) Phosphatidylserine decarboxylase beta chain {ECO:0000255|HAMAP-Rule:MF_00662} KW=Complete proteome OX=458817 OS=Shewanella halifaxensis (strain HAW-EB4). GN=Shal_3643; OC=Shewanellaceae; Shewanella.
Sequence
MDKVKIALQYIMPKHLLSRLVGKLAAAEMGSVTTAAINWFIKQYKIDMSEAAEPEATAYS
CFNDFFTRALKPGIRPLCDDNDYIVHPVDGAVSQLGPIKEGRIFQAKGHDYSSLALLGDQ
ADDAKRFEGGDFATIYLAPKDYHRIHMPIKGTLSKMTYVPGELFSVNPLTAENVPGLFAR
NERVVAIFETEIGPMAMVLVGATIVASIETVWAGTVTPPTGKKVFTWDYPTEGPNALTLE
KGAEMGRFKLGSTVVMLFAKDALDEFADGVEPRSVTRMGQAFAKIED
Download sequence
Identical sequences B0TU73
gi|167625549|ref|YP_001675843.1| 458817.Shal_3643 WP_012278703.1.86919

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]