SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for C6LKU6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  C6LKU6
Domain Number 1 Region: 47-63,90-248
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000159
Family 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain 0.083
Further Details:      
 
Weak hits

Sequence:  C6LKU6
Domain Number - Region: 353-391
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0575
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) C6LKU6
Sequence length 418
Comment (tr|C6LKU6|C6LKU6_9FIRM) Uncharacterized protein {ECO:0000313|EMBL:EET58694.1} KW=Complete proteome; Reference proteome OX=478749 OS=Marvinbryantia formatexigens DSM 14469. GN=BRYFOR_09293 OC=Marvinbryantia.
Sequence
MGRFVNLDNSAFQVALNSRIYVDKTGLLKYTNSVLDTMEGYICNSRPRRFGKSYAANMLA
AYYSKGAESEQMFTGLEISKDPEFKKHLNKYDVIHIDVQWFLANCEDVNSIVQFITNAVL
DELRDIHPSTLPQNVSFLSDGFLRIREKTGQKFIIIIDEWDVLIRDEAMNKKVQDEYLNF
LRGMFKGTEPTKYIQLAYLTGILPFRKDKSQSAVNNLRHYSMLSAGPLAPYIGFTEDEVK
KLCEEYNRDFDEVKRWYDGYVVGKFHVYNPNAVVQLMTNEEFQSYWSGTASYEAIVPLIN
MNYDGLKSAIIEMLSGDQVKIDVTSFQNDTVHFANRDDVITYLIHLGYLAYDQKEQAAFV
PNEEIRQELIRATRRKKWDELIRLQKESEDLLDATLNMENETVANQIEKIHDRYLPMN
Download sequence
Identical sequences C6LKU6
WP_006864045.1.13843 WP_006864045.1.48157

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]