SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for D6D6N5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  D6D6N5
Domain Number 1 Region: 75-176
Classification Level Classification E-value
Superfamily TPR-like 0.00000000296
Family Tetratricopeptide repeat (TPR) 0.014
Further Details:      
 
Weak hits

Sequence:  D6D6N5
Domain Number - Region: 258-289
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0157
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) D6D6N5
Sequence length 358
Comment (tr|D6D6N5|D6D6N5_9BACE) Uncharacterized protein {ECO:0000313|EMBL:CBK65680.1} KW=Complete proteome; Reference proteome OX=657309 OS=Bacteroides xylanisolvens XB1A. GN=BXY_04230 OC=Bacteroides.
Sequence
MMLLSLAACHPEGTSVKQGLDKAAQLMEQDPDTASIILETIQSSQMNEAQLAEYNLLCTQ
LNEDKNIPHSSDKQIRQAASYYEKHGDEYQKSKVYYYLACVESDLEQKEDAEIHFKEAIK
LAKETEEYDHLAKICKRCSLYYQKYGNFDEALEMERKAYASQLILNDNKSDSSVILSSAL
GMFGVMSLLLGLLWKKNRHALSQLNLFKEEILKKDVESDKLMLRCNHLEEKYQSLQLHIY
ESSPVVSKVRQFKERNVLSSKIPSFSEKDWTELLRLQENVYGLVSKLKEISPKLTEEDLR
VCAFLREGVQPAYFADLMKLTTETLTRRISRIKTEKLMLINSKESLEDIIKSLGTSPL
Download sequence
Identical sequences D6D6N5
gi|479162527|ref|YP_007791261.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]