SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for D6LHV7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  D6LHV7
Domain Number 1 Region: 110-293
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 1.57e-39
Family Multidrug efflux transporter AcrB transmembrane domain 0.0046
Further Details:      
 
Weak hits

Sequence:  D6LHV7
Domain Number - Region: 56-100
Classification Level Classification E-value
Superfamily Hypothetical protein Yml108w 0.0968
Family Hypothetical protein Yml108w 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) D6LHV7
Sequence length 318
Comment (tr|D6LHV7|D6LHV7_9FUSO) Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464} KW=Complete proteome; Reference proteome OX=469621 OS=Fusobacterium periodonticum 1_1_41FAA. GN=HMPREF0400_01317 OC=Fusobacterium.
Sequence
MKVNLHIIRNIKYYLSVSIVLVILSIVVFFAKGLNYGIDFTGGNLFQLKYNDKKITLTEI
NENLDKLSEKLPQVNSNSRKVQISEDGTVILRVPELKEEDKKEILNSLQELGAFNLDKED
KVGASIGDDLKKSAIYSLGIGAILIVLYITLRFEFSFAIGGILSLLHDIIIAIGFIALMG
YEVDTPFIAAILTILGYSINDTIVIYDRIRENLKRRHTKNWTLEDCMDESVNQTAIRSLN
TSITTLFSVIALLIFGGASLKTFIMTLLIGILAGTYSSIFIATPIVYILNKRKGNNMEDM
FKDDDENNDGKRVEKILV
Download sequence
Identical sequences D6LHV7
WP_008821250.1.60449

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]